KEGG   Spiroplasma sabaudiense: SSABA_v1c00920
Entry
SSABA_v1c00920    CDS       T03048                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ssab  Spiroplasma sabaudiense
Pathway
ssab03420  Nucleotide excision repair
ssab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SSABA_v1c00920 (pcrA)
   03430 Mismatch repair
    SSABA_v1c00920 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssab03400]
    SSABA_v1c00920 (pcrA)
Enzymes [BR:ssab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SSABA_v1c00920 (pcrA)
DNA repair and recombination proteins [BR:ssab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SSABA_v1c00920 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     SSABA_v1c00920 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 AAA_12 AAA_30
Other DBs
NCBI-ProteinID: AHI53504
UniProt: W6AIH2
Position
106810..108990
AA seq 726 aa
MSTQFIKDLNVDQLSAVTIADKPLRVIAGAGSGKTKVITSKITYLISELGIPSWKILAVT
FTNKATKEMKTRVQKMMPELKSQPFISTFHALCVRILREEFLEVNLEKNFLIIDTTDQKN
IINKILKNINISSDSIRKYEKIAINKISDWKNNFMSPAEVQDQANSEFDFQMAKTYERYL
AELKRLNSVDFDDLILLVHKLFKTNIVIQEKWRNRFDYVLVDEFQDTNEIQFDLIKWLTL
GKDNLTVVGDPDQTIYSWRGAQVGIILNFEKNYKNAKTVILKENYRSTQNILNLASDFIT
HNKNREAKEVFSNKSSGEKIALKEAASKAFEAKFVVEKIKELVEKENYKYSDFYILYRIN
AWSLDFEKALNHSKIPFQMVGGLKFRDRKVIKDILALLKLATFGDDLAALRVLGFTPKVG
AVTIEKLSNIAQENNLSIYELLTTREDLVNLVSKNLGDIIAALLEGQSLINQGIGVFEFT
KKMLNLTGYWDRLKFLNKDDDSLQNLQAFLDQVEIFDKDFKVDEYGEENHVLAFLQNEAL
DNSEIDNFTANKVTLMTIHAAKGLENKVVFIVGLNNNVFPLRSAFNSISSLEEERRALYV
AITRAEERLFLSYVVGERSYISDGELSPSLFIKELNQDLYDFEKNIFYHSDGVMSSNHFD
NFNASLPTAQKIDSNYKKGVLVKHVIFGDGVVTKVLERQVMVAFDNPKIGVMSISINSTA
LQIIKH
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgagcacacaatttataaaggacttgaatgttgaccaactaagcgctgttacaattgct
gataaaccattgagggtaattgcaggggctggtagcgggaagacaaaggttattacatca
aaaattacctatttaatttctgaactaggaattcccagttgaaaaattttagcagtgaca
tttacaaataaggctactaaagaaatgaagacgcgagttcaaaaaatgatgccagaacta
aaatcacaaccatttatcagtacttttcatgccttgtgtgtcagaattttgcgtgaagaa
tttttagaagtaaatttagaaaaaaactttttgattattgatacaacagatcaaaaaaat
attatcaataaaatcttaaaaaacattaatattagctcggattcaattcgtaaatatgaa
aaaattgcaataaacaaaatttcagattgaaaaaataactttatgagcccagcagaagtt
caagatcaagcaaatagtgaatttgattttcaaatggcaaaaacttatgagagatatttg
gctgagttaaagcgtttaaactcagttgattttgatgacttaatcttactggtgcataag
ttatttaaaacaaatattgttattcaagaaaaatgaagaaaccgctttgattatgtttta
gtagacgaatttcaagatacaaatgaaattcaattcgatttaattaagtgattaacttta
ggaaaagataacttaacagttgttggtgatcctgaccaaacaatttattcttgacgcggg
gcccaagttggcattatattgaattttgaaaaaaattacaaaaatgctaaaactgttatt
ttgaaagaaaattaccgttccacccaaaacattctaaatttggcaagtgattttataacc
cacaataaaaaccgagaagcaaaagaagttttttcaaataaaagtagcggtgaaaaaatc
gccttaaaagaagcggcatcaaaggcgtttgaagctaagtttgtcgttgaaaaaattaaa
gaattggttgaaaaagaaaattataagtactctgatttttatattctatatcgtatcaat
gcctggtcgctagattttgaaaaagcgctaaaccattcaaaaattccgtttcaaatggtt
gggggactgaaatttcgcgaccgtaaggtaatcaaagatattttagcacttttaaaactt
gcaacatttggggatgatttagcagccttaagagttcttggttttacaccaaaagttgga
gcagtgacgattgaaaaattaagcaatattgcacaagaaaacaatttatcgatttatgaa
cttttgacaactcgagaagatctagttaatttggtatctaaaaatttaggtgatattata
gcggcactattggaaggtcaaagtttaattaatcagggaattggagtttttgaatttaca
aagaaaatgctaaatttaactggatattgagaccgcctaaaatttttaaataaagatgac
gacagcttgcaaaatctacaggctttcttggatcaagtcgaaatttttgacaaggatttt
aaagtcgatgaatacggcgaagaaaatcacgtcctagcatttttgcaaaatgaggctttg
gataattcagaaattgataattttacggcaaacaaggtaactttaatgacaattcacgca
gctaaaggattagaaaacaaagttgtttttattgtcggtttaaacaacaacgtcttccca
ttaaggtcggcctttaattcaatttctagtctagaagaagaaagaagagccttgtatgtt
gcgattacaagagcagaagaaaggttattcctttcatatgttgttggagagcgctcttat
atttcagatggtgaactatcacctagtctgtttattaaagaacttaatcaggatttatac
gattttgaaaaaaatattttttatcactctgatggagttatgagctcaaatcattttgat
aactttaatgcttcattgccaacagctcaaaaaattgattccaattataaaaagggagtt
ttggtaaagcacgttatttttggtgatggtgttgtaacaaaagttcttgagcgccaagta
atggtggcatttgataatccaaaaattggggtaatgtcaatttcaattaatagcactgca
ttacaaataataaagcattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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