KEGG   Sphingomonas sanxanigenens: NX02_16965
Entry
NX02_16965        CDS       T03929                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ssan  Sphingomonas sanxanigenens
Pathway
ssan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NX02_16965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssan03400]
    NX02_16965
DNA repair and recombination proteins [BR:ssan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NX02_16965
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NX02_16965
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD UB2H AAA_30 AAA_16 SWI2_SNF2 DUF87 AAA_22 FAM192A_Fyv6_N FATC Kinesin SRP54
Other DBs
NCBI-ProteinID: AHE55071
UniProt: W0ADC0
Position
3554636..3556828
AA seq 730 aa
MAIQIRTTLDEPDTGQSFVPHRPQRPEKTEGGRPFKLVSDYEPSGDQPTAIAELVGQARQ
GERDQVLLGVTGSGKTFTMAKVIQTLQRPALVLAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRSLLERDDVLIVASVSCLYGIGS
VETYSAMIFDLKKGQTVDQREIVRKLVALQYKRNDAAFTRGTFRVRGDSLEIFPSHYEDT
AWRVAFFGDDIEEIVEFDPLTGKKVASLDHVRVFANSHYVTPGPTLKQAMEAIRFELTER
LKELHIEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTIGQVNGMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
YVSATPGDWEMQQTGGVFAEQVIRPTGLIDPPVEIRPVESQVDDLIHEARETAAKGYRTL
VTTLTKRMAEDLTEYLHEAGLKVRYMHSDTETLERIELIRDLRMGVYDILVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERAMRETER
RREKQEAYNTEHGITPQTIKRNISDVISHLSSRDQVTVEIDDERPHMVGHNLRSYIEELE
KKMRKAASDLEFEEAGRLRDEIRALEAEELGLPEAERKAPIMGRSNEGKPGTRKTRFGKT
QRKFGGGSRK
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggcgatccagatccgtaccacgctcgacgagcccgataccggccagagcttcgttccc
catcgtccccagcgccccgagaagaccgagggcggccggccgttcaagctcgtgtcggac
tatgaaccttcgggcgaccagccgaccgcgatcgccgaactggtcgggcaggcgcggcag
ggcgagcgcgaccaggtgctgctgggcgtcaccggctcgggcaagaccttcaccatggcg
aaagtcatccagacgctgcagcgccccgcactggtgctggcgcccaacaagatcctcgca
gcccagctctatggcgagttcaagagcttcttccccgagaatgcggtcgaatatttcgtc
agctattacgactattaccagcccgaggcctatgtgccgcggtccgacacctacatcgag
aaggaaagctcggtgaacgaggcgatcgaccgcatgcgccactccgcgacgcgatcgctg
ctggagcgcgacgacgtgctgatcgtcgcctcggtctcgtgcctctacggcatcggctcg
gtcgagacctattcggcgatgatcttcgacctcaagaagggccagaccgtcgaccagcgc
gagatcgtccgcaagctggtggcgctgcaatacaagcgcaacgacgccgccttcacccgc
ggcacctttcgcgtgcgcggcgacagcctggagatcttcccctcgcactatgaggataca
gcgtggcgcgtcgccttcttcggcgacgatatcgaggagatcgtcgagttcgatccgctg
accggcaagaaggtcgcgagcctcgaccatgtccgcgtgttcgccaacagccactatgtg
acgccggggccgaccttgaagcaggcgatggaggccatccgcttcgagctgaccgagcgg
ctcaaggaattgcacatcgagggacggctgctggaagcgcagcggctggagcagcgcacc
aatttcgacctcgagatgatcgcggcaacgggcagctgcgccggcatcgagaattacagc
cgcttcctgaccggccggcttccgggggagccgccgcctacgctgttcgagtatctgccg
gaaaacgcgctgctgttcgtcgacgagagccaccagacgatcggtcaggtcaacggcatg
gcgcgcggcgaccatcgccgcaagatcacgctcgccgaatatggcttccgcctgccgagc
tgcatcgacaaccgcccgctgcgcttcaacgagtgggacgcgatgcgcccgcagaccgtc
tatgtctcggcgacgcccggcgactgggagatgcagcagaccggcggcgtgttcgccgaa
caggtgatccgcccgaccggcctgatcgacccgccggtggagatccgcccggtcgagagc
caggtcgacgacctgatccacgaggcgcgcgagaccgccgccaagggctatcgcacgctg
gtgacgacgctcaccaagcggatggcggaggatctgaccgaatatctccacgaggccggc
ctcaaggtccgctacatgcactcggacaccgagacgcttgagcgcatcgagctgatccgc
gacctgcgcatgggggtgtacgacatcctcgtcggcatcaacctgctgcgcgaggggctc
gacattcccgaatgcgggctggtcgcgatcctcgatgccgacaaggaaggcttcctgcgt
tcggagacgtcgctgatccagacgatcggccgcgccgcgcgcaacgtggacgggcgggtg
atcctctatgccgatcgcatcaccggcagcatggaacgcgcgatgcgcgagaccgagcgg
cggcgcgagaagcaggaagcctataacaccgagcatggcatcaccccgcagacgatcaag
cgcaacatctccgacgtgatcagccatttgtcgtcgcgcgaccaggtgacggtggagatc
gacgacgaacgcccgcacatggtcggccacaatctgcgcagctatatcgaggagctcgaa
aagaagatgcgcaaggccgcctccgacctcgaattcgaggaggccgggcgtctgcgcgac
gagatccgtgcgctggaggcggaagaactggggctccccgaggcggagcgcaaggcgccg
atcatgggccgcagcaacgagggcaagcccggcacgcgcaagacgcggttcggcaagacg
cagcgcaagttcgggggcggcagccgaaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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