KEGG   Streptococcus suis BM407 (serotype 2): SSUBM407_1792
Entry
SSUBM407_1792     CDS       T00935                                 
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ssb  Streptococcus suis BM407 (serotype 2)
Pathway
ssb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SSUBM407_1792 (pnpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssb03019]
    SSUBM407_1792 (pnpA)
   03016 Transfer RNA biogenesis [BR:ssb03016]
    SSUBM407_1792 (pnpA)
Enzymes [BR:ssb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SSUBM407_1792 (pnpA)
Messenger RNA biogenesis [BR:ssb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SSUBM407_1792 (pnpA)
Transfer RNA biogenesis [BR:ssb03016]
 Prokaryotic type
  tRNA degradation factors
   SSUBM407_1792 (pnpA)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 PCB_OB
Other DBs
NCBI-ProteinID: CAZ56648
UniProt: A0A0H3MXB8
Position
complement(1878416..1880635)
AA seq 739 aa
MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDP
DASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELIINPDQAQQEASLLELTVAGN
KDAINMVESGAKELSEEVMLEALLKGHAAIQELLDFQNQIVAAVGKEKADVELLQVDPEL
QAEIVAAYNDDLKKAVQVEEKLAREDATNAVRETVIATYEEKYAEHEEFDRIMRDVHEIL
ELMEHTEVRRLITEDKVRPDGRRVDEIRPLDAEVDFLPNVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDDEYKKRFLHHYNFPQYSVGSTGRYGAPGRREIGHGALGERALEQVLPS
LEDFPYAIRLVAEVLESNGSSSQASITAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIDGITPQILEEALAQAKKARFEILDVI
EATIPEVRPDLAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAI
FSPDRAAIERTKEIIAGLVREAKVDEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWT
RVNKPEDLVEVGDVVDVKVIKIDDKGRIDASMKALLPKPEGYVEPEKRERSEKPRRHKEH
KEKKDNNFGEFKFHKVDKK
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgtcaaaacaagtatttgaaacggtttttgctggcaaaaaattggtcgttgaaacaggt
caagttgccaaacaagccaacggtgcggttgtcgttcgctacggtgattccacagttctt
acagcggcagttatgtcaaaaaaaatggcgacgggagacttcttccccctccaagtcaac
tatgaagagaaaatgtacgctgctgggaaattcccaggtggctggatgaagcgtgaaggt
cgtccgtcaactgatgcgaccttgacagctcgtttgattgatcgtccgattcgtccaatg
tttgcggaaggtttccgtaacgaagttcaagtcatcaacacagtgctttcttatgatcca
gatgcatctgctccaatggcagccatgtttggttcctcattggcattagcgatctcagac
attccattcaatggtccaattgctggtgttcaggttggttatgttaatggcgaattgatt
attaacccagatcaagctcaacaagaagcctcccttttagaattgacagttgctggtaac
aaagacgctatcaacatggttgaatcgggtgccaaagaattatcagaagaagtgatgttg
gaagcactcttgaaaggtcatgcggccattcaagaactcttggatttccaaaatcaaatc
gtggcagcagttggtaaggaaaaagcagatgtggagcttcttcaagtggacccagaattg
caggctgagattgttgcagcttacaatgacgatttgaaaaaagcggtgcaggttgaagaa
aaattggcccgtgaagatgcgaccaatgccgttcgcgagactgtcattgcaacttacgaa
gaaaaatacgctgagcacgaagaatttgaccgtatcatgcgtgatgtccatgaaatcttg
gaactcatggagcatacagaagttcgtcgtttgattactgaagacaaggtccgtccagat
ggtcgccgtgttgatgagattcgtcctttggatgcagaagtagacttcttgccaaatgtt
cacggctcaggtctctttacccgtggtcaaacgcaagccctctctgtcttgaccttggca
ccaatgggagaaacccaaatcatcgacggtttggatgatgagtacaagaaacgcttcttg
catcactacaatttcccgcaatactcagttggctcaactggtcgttacggtgcaccaggt
cgtcgtgagattggtcacggtgctctcggtgagcgcgctcttgagcaagtcttgcctagc
ttggaagacttcccttacgctatccgcttggtagcagaagtcttggagtcaaacggttct
tcttcacaggcatctatcacagctgggacccttgcccttatggcaggtggtgtgccaatc
aaggcacccgttgcagggattgctatgggtctgatctcagatggtaccaattacaccgtc
ttgaccgatattcaaggtcttgaggatcacttcggcgacatggacttcaaggtagctggt
actcgtgacggtatcacagcccttcaaatggatattaaaattgacggtatcacaccacaa
atcttggaagaagccttggcacaagctaagaaggcacgttttgaaatccttgatgtcatc
gaagcgactatcccagaagttcgtcctgacttggcaccaactgcaccgaagattgacact
atcaagattgatgtggacaagatcaagattgtcataggtaagggtggtgaaaccattgat
aagattattgcagaaactggcgtgaaaattgatatcgacgaagacggtcttgtggcgatc
ttctcaccagaccgtgctgcaattgagcgcacaaaagaaatcatcgctggtcttgtccgt
gaagcaaaagtggacgaagtcttccaagcaaaagtggttcgtttggagaaattcggtgcc
tttgtcaacctttttgacaagaccgatgccctcgtccacgtttctgaaatggcttggaca
cgtgtcaataaaccagaagatttggttgaggttggcgatgttgtagatgttaaggtgata
aaaattgatgataagggacgtattgatgcttctatgaaagctcttctaccaaaaccagaa
ggctacgtggaaccagaaaaacgtgaacgttcagaaaaacctcgtcgtcataaagaacac
aaagagaaaaaagataataactttggtgaatttaaatttcataaagtagataaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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