KEGG   Sus scrofa (pig): 100154213Help
Entry
100154213         CDS       T01009                                 

Gene name
USP40
Definition
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
  KO
K11869  
ubiquitin carboxyl-terminal hydrolase 40 [EC:3.4.19.12]
Organism
ssc  Sus scrofa (pig)
Brite
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100154213 (USP40)
Peptidases [BR:ssc01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100154213 (USP40)
Ubiquitin system [BR:ssc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100154213 (USP40)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Position
15
AA seq 1222 aa AA seqDB search
MFGDLFEEDYSSVSNNHYGKGKKLKTKTLEPSAPREFTNLSGIRNQGGTCYLNSLLQTLH
FTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDS
FGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQVVCKDCKNVSE
KQEDFLDLTVAVKNVSSLEDALWNMYVEEEVFDYDNLYHCGTCDKLVKAAKSAKLRKLPP
FLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYMYDLFSVIIHKGG
CYGGHYHVYIKDVDHLGNWQFQEDKSNPDVNLEDLQSEKEIDDPLMILKAILLQEESNQI
PVDQLGQKLLKKKGVSWNKKYRKQYGPLRKFLQLHSQMFQLSSDERTVSLLKDRSLQAES
DFQRSDQKTSTSESPGLNDRPSCPHWFDINDAKVQPIKEKDIEQQFQGKESAYMLFYRKS
QLQRPPEARANPRYRVPCHLLNEMDAANIELQMKRAECDSTNNSFELHLHLGPHYHFFNG
ALHPVVSQTESMWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSIAKFVPAGLHVYQTLD
GDDLTLCETEIADGEDIFVWNGVEVGGIQIPTGSDCEPLLLNVLHLGTSSEGEESQQLVE
SPHVFPSNAELGTVFAALSVPEGVVLINSTTSLGEESWTALAKEDLKKTFREQGLRNGST
VLIQDSNDDSSFLTKQGKWITSTNEIDWLQVKNLCQLESEEEQVKISATLNTVVFDIRTK
AIKELKLMKELAENSCLRPIDRKGKLLCPVPDSYTLKEAELKPGSLLGLCPGKAPTSSQL
FLFFAVGSDVQPGTEMEIIVEETVSVRGCLKIMLEKSGLSGDTWHLRKMDWCFEAGEPLC
EEDATLKELMICSGDTLLLIEGKLPPLGFLKVPIWWYQPRGPWRHWHHQDQMDCTFAQGA
PGDRQAEVSLHYLGDIEISEDATLGELKSQALTLPNFSEFPVPSPAFLRAWTVEYKRPGR
LLRVHQQQLKEYKLGKRTEICLEPLQKEEHLGPQDVLLRTQMRLPGKRAYALPVDLVWDT
ARGWTAGSLRQRVANFCSLPVEKIEIAKYFPEKFEWLPISSWNQQITKKKKKKKQDNLQG
APYYLKDGDTIGIKNLLLEDDDDFSTDGDDAGRGQQELLALGRKQSHEALRVQSSDNVSG
AEMPARPRGPEASLSIRVGSFR
NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt
atgtttggggacctatttgaagaggactattccagtgtgtcaaataatcattatggaaaa
gggaagaaattaaagaccaaaactttggagccatctgctcctagagaattcaccaattta
agtggaatcagaaatcagggtggaacctgttacctcaattcccttcttcagactcttcat
ttcacacctgaattcagagaagctttgttttctcttggcccagaggagctcggttcatta
gaggataaggataagcctgatgcaaaggtccgaatcatacctttacagttacagcggctg
tttgcacagctcctgctcttggaccaggaagctgcatccacagcagacctcactgacagc
tttggatggaccagcaatgaggaaatgaggcaacatgatgtgcaggaactgaatcgaatt
ctctttagtgctttggaaacttctttagttgggacctccggccatgacctcatcaatcgt
ctgtatcacggaaccattgttaaccaggttgtttgtaaagactgtaagaatgtcagtgaa
aagcaggaagacttcttagatctcacagtggctgtcaagaatgtatcaagtttggaagat
gccctctggaacatgtatgtagaagaggaagtttttgactatgacaacttataccactgt
ggaacttgtgacaagctggttaaagcagcaaagtcggccaaattacgtaagctgcctccc
tttctcactgtttcattactaagatttaattttgattttgtgaagtgtgaacgatacaag
gaaactagctgctatacattccctctccggatcaacctcaagcctttttgtgaacagagt
gaattagatgacttggaatatatgtatgacctcttctcggttattatacacaagggtggt
tgctatggaggacactatcatgtgtatattaaagacgttgatcatttgggaaactggcag
tttcaagaggacaaaagtaacccagatgtgaatttagaagatcttcagagtgaaaaagag
attgatgatccattgatgattctaaaagcaatcttattacaggaggagagtaatcaaatt
cctgttgatcagctgggccagaaactcttgaaaaagaaaggagtgtcttggaataagaag
tacagaaaacagtatggaccactgcgaaagttcttacagcttcactctcagatgtttcag
ctcagttcagatgaaagaacagtgagtctgttgaaggaccgttctctccaggctgagtct
gatttccaaaggagtgatcaaaagacaagtacttcagagtccccaggtttaaacgataga
ccctcctgtccccactggtttgatataaatgacgccaaagtccagccaatcaaggaaaag
gatattgaacagcaatttcagggtaaagaaagtgcctacatgttgttttatcggaaatcc
cagttgcagagaccccctgaagctcgagctaacccaagatacagggttccatgtcatttg
ctgaatgaaatggatgcagccaacattgaactacaaatgaaaagggcagaatgtgattct
acaaacaatagttttgaattgcatctccacctcggcccccattatcatttcttcaatggg
gctctgcacccagtagtctcacaaacagaaagcatgtgggatttgacctttgataaaaga
aaaactttaggagatcttcgacaatcaatatttcagctgttagaattttgggaaggagat
atggttcttagtattgccaagtttgtgccagcaggacttcacgtttaccagacacttgat
ggagatgacctgacactgtgtgaaactgagattgctgatggggaagacatctttgtctgg
aatggggtggaggttggtggaatccagattccaaccggtagtgactgtgaacctctgctt
ttaaatgttcttcatctgggcacaagcagcgaaggagaggagagtcagcagttggtggaa
tctccgcatgtctttccatctaacgcggaactaggcactgtgttcgcagccttgtcagtc
ccagaaggggtcgtcttaatcaacagcaccacatctctaggtgaggagagctggaccgcc
cttgccaaggaagacttgaagaagactttcagagaacaaggtctcagaaatggaagcaca
gttttaattcaggattctaatgatgatagcagttttttgaccaaacaagggaaatggatc
actagtacgaatgagattgactggctccaagttaaaaatttatgccaattagaatctgaa
gaggagcaagttaaaatatcagcaactcttaacacagtggtgtttgatattcgaactaaa
gccataaaggaattaaaattaatgaaggaactagctgaaaacagctgtttgaggcctatt
gacagaaaggggaagcttctttgtccagtgccagacagttacactttgaaggaagcagaa
ttgaagccggggagtttattgggcctctgtcctggaaaagcaccgacatcttctcagcta
ttcctgttttttgctgtcgggagtgatgttcagcctgggacagagatggagatcatagtg
gaagaaacagtatctgtaagaggttgtttaaagataatgctggagaaatctggcctgtca
ggagacacatggcatttacgaaaaatggattggtgctttgaagctggggagcctttatgt
gaagaagatgcaacactgaaagagcttatgatatgttctggagataccttgcttttaatt
gaaggaaaacttcctcctctgggcttcctgaaggtgcccatctggtggtaccagccacgg
ggtccctggcgtcactggcatcatcaggaccagatggactgtacctttgctcaaggtgct
cctggtgacaggcaggcggaagtttctctccactacttgggagacattgaaatctcagaa
gatgccaccctgggggagctgaagtctcaggccctgaccttgccgaacttctcggagttt
cccgtcccttccccagccttcctcagagcctggacggtggagtacaagcggcccggcaga
ctcttacgcgtccaccagcagcagctcaaggaatataagttggggaagagaactgagatc
tgcttagagccccttcagaaagaagaacacttgggcccccaggatgtgctgctgaggaca
cagatgcgcctccctggcaagagggcatatgctctgcccgtggacttagtgtgggacacg
gcccgaggctggacggctggctccctgaggcagcgagtagccaatttctgttctcttcct
gtggagaaaatcgaaattgccaaatactttcctgaaaagtttgagtggcttccaatatct
agctggaaccagcaaattactaagaaaaagaagaagaaaaagcaagataatttgcagggg
gcaccttattatttgaaagatggagatactattggtattaagaacctcctgctcgaagac
gacgacgatttcagcacagacggagatgacgccgggagaggacaacaggaactgctcgct
ctggggaggaagcaaagccacgaagcccttcgcgtgcagagcagcgacaacgtctctggt
gcagagatgcctgcccggccccgtggaccagaagcttctctctccatccgcgtggggagt
ttccgatag

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