KEGG   Sus scrofa (pig): 100155420
Entry
100155420         CDS       T01009                                 
Symbol
SNU13
Name
(RefSeq) NHP2-like protein 1
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03008  Ribosome biogenesis in eukaryotes
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100155420 (SNU13)
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100155420 (SNU13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100155420 (SNU13)
   03009 Ribosome biogenesis [BR:ssc03009]
    100155420 (SNU13)
Spliceosome [BR:ssc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    100155420 (SNU13)
Ribosome biogenesis [BR:ssc03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    100155420 (SNU13)
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1
Other DBs
NCBI-GeneID: 100155420
NCBI-ProteinID: NP_001177155
Ensembl: ENSSSCG00000000058
UniProt: A0A8D0IT75 A0A4X1W4V1
Position
5:6891014..6900026
AA seq 128 aa
MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQ
QSIERLLV
NT seq 387 nt   +upstreamnt  +downstreamnt
atgactgaggctgatgtaaatccgaaggcctaccctcttgcagatgcccacctcaccaag
aaactattggaccttgttcagcagtcatgtaactacaagcagcttcgaaaaggagccaat
gaggccaccaaaaccctcaacagaggcatctctgagttcattgtgatggctgcagacgcg
gagcccctggagattatcctgcacctcccactgctgtgtgaggacaagaacgtgccctat
gtgttcgtgcgctccaagcaggccctggggcgagcctgtggggtctccaggcctgtcatc
gcctgttctgtcaccatcaaagaaggctcacagctgaagcagcagatccagtccatccag
cagtccatcgaacggctcttagtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG ORTHOLOGY (1)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (100)   

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