KEGG   Sus scrofa (pig): 100271929Help
Entry
100271929         CDS       T01009                                 

Gene name
CLTC
Definition
clathrin, heavy chain (Hc)
Orthology
K04646  
clathrin heavy chain
Organism
ssc  Sus scrofa (pig)
Pathway
Lysosome
Endocytosis
Synaptic vesicle cycle
Endocrine and other factor-regulated calcium reabsorption
Huntington's disease
Bacterial invasion of epithelial cells
Class
Cellular Processes; Transport and catabolism; Endocytosis [PATH:ssc04144]
Cellular Processes; Transport and catabolism; Lysosome [PATH:ssc04142]
Organismal Systems; Excretory system; Endocrine and other factor-regulated calcium reabsorption [PATH:ssc04961]
Organismal Systems; Nervous system; Synaptic vesicle cycle [PATH:ssc04721]
Human Diseases; Neurodegenerative diseases; Huntington's disease [PATH:ssc05016]
Human Diseases; Infectious diseases; Bacterial invasion of epithelial cells [PATH:ssc05100]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
12
AA seq 1675 aa AA seqDB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq 5028 nt NT seq  +upstreamnt  +downstreamnt
atggcccagattctgccaattcgttttcaggagcatcttcagctccagaacctgggtata
aacccagcaaacattggcttcagtaccctractatggagtcagacaarttcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaattattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagctagcaaagtaatt
gcactaaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaaa
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaataccgttgct
cttgttacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgtcattctagccttgcagggtgccagattatcaattatcgtactgatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagctatattctgtagataggaaagtgtctcagcccattgaaggacatgcagctagc
tttgcacagtttaagatggaaggaaatgcagaagaatcaactttattttgctttgcagta
cggggtcaggctggagggaagttacatattattgaagttggcacaccaccaacagggaac
cagcccttcccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagataagtgagaaacatgatgtagtattcttgattacgaagtatggc
tatatccacctctatgatcttgagactggtacctgcatctacatgaatagaatcagtggg
gaaacaatctttgttactgcacctcatgaagccacagctggaataattggagtaaacaga
aagggacaagttctctcagtatgtgtggaagaagaaaacataattccttatatcaccaat
gtcctacaaaatcccgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcgaaggtggctgctaatgcaccaaagggaatccttcgtaccccagataccatccgtcgg
ttccagagtgttccagcccagccaggtcaaacttctcctctacttcagtactttggaatc
cttttggatcagggccagctaaacaaatatgaatccttagaactgtgtaggccggtactt
cagcaagggcggaaacagcttttggagaaatggttaaaagaagataagctggaatgctct
gaagaactgggtgaccttgtgaaatctgtggacccgacattggcacttagtgtataccta
agggctaatgttccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatatactccagactggatcttcctgctgagaaat
gttatgcgtatcagtccmgatcagggacagcagtttgctcaaatgttagttcargatgaa
gaacctcttgctgatatcacacarattgtcgatgtgtttatggaatacaatctaattcag
cagtgyactgcattcytgcttgatgccctgaagaataatcgcccatctgaaggtccttta
cagacaaggctgcttgagatgaaccttatgcatgcacctcaagtcgcagatgctattcta
gggaatcagatgttcacgcattatgaccgggctcatatygctcagctgtgtgaaaaggct
ggcctcttgcagcgtgcattagaacacttcactgacttatatgatataaagcgtgccgtt
gttcacacacatcttcttaaccccgagtggttagtgaattactttgggtccttatcagta
gaagactccctggaatgcctcagggccatgctatctgccaatattcgacagaatctacag
atctgtgtgcaagtggcttctaagtatcatgaacagctgtcaactcagtctctrattgaa
ctwttcgaatctttcaagagttttgaaggtcttttttatttcctggggtccattgttaac
tttagtcaagacccagatgtgcactttaaatacattcaggcagcttgtaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgttatgatcctgagcgagtcaag
aattttctcaaggaagcgaagctaacagatcagttaccacttatcattgtgtgtgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtggtaattggaggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaagttgaaaaaagaaacagattgaaactgcttctgcct
tggctggaggccagaattcatgagggctgtgaagagcctgctactcacaatgcattagcc
aaaatctacatagacagtaataacaacccagagagatttcttcgagaaaatccttattat
gacagtcgtgttgttggaaagtactgtgagaagagagatccacatctggcctgtgttgct
tatgagcgtggccagtgtgatctggaacttattaatgtttgcaatgagaattctctcttc
aaaagtctttcccgctatctggtacgcagaaaggatccagaattgtggggtagtgtgctg
ctggaaagcaatccttacagaagacccctgatcgatcaggttgtacagacagccttgtct
garactcaggaccctgaagaagtgtcagtaactgtcaaggcttttatgactgcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtcttcagtgaa
cacaggaatctgcaaaatcttctgatcctcactgcaatcaaagctgaccgtacccgtgtt
atggaatatattaaccgcctggataattacgatgccccagatattgccaatattgccatc
agcaatgagctgtttgaagaagcatttgccatttttcggaaatttgatgtcaatacttca
gcagtgcaggtcttgattgaacacattggaaacttagaccgggcttatgagtttgctgaa
cgctgcaatgaacctgcagtctggagtcagcttgcaaaagcccagttgcagaaaggaatg
gtaaaagaagccattgattcttacatcaaagcagatgatccttcatcctacatggaagtt
gttcaggctgccaatactagtggaaactgggaagagctggtgaagtacttgcagatggcc
cgtaagaaggctcgtgagtcctatgtggagacagaattgatatttgcactggctaaaaca
aaccgcctcgcggagttagaagaattcatcaatgggccaaataacgctcatatccaacaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagttgttatacaataat
gtttccaattttggacgcttggcatctactctcgttcatctgggtgaatatcaggcagct
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgcttcgcgtgt
gtagatgggaaggagttccgtctcgctcagatgtgtgggcttcacattgtagtacatgca
gatgaattggaggaacttattaactactatcaggatcgtggatattttgaagaactgata
accatgttggaagcagcactgggacttgagcgtgctcatatggggatgtttaccgaatta
gctattctgtattctaaatttaagccacagaaaatgagggagcacttggagctgttttgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ttggtatttttgtatgacaagtatgaagaatatgataatgccataattaccatgatgaat
catccgaccgatgcatggaaagaagggcagttcaaagatatcattaccaaggttgccaat
gtggaactatactacagagcaatacagttctacttagaattcaagccgctgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgcagtcaattatttcagc
aaggttaaacagctgccactggtgaaaccgtatttgcgttcagtccaaaaccacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctcta
cgaacctcaatagatgcttatgacaactttgacaatatctcgcttgctcagcgtttggaa
aaacatgaactcattgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtggagctgtgcaagaaagatagtctgtacaaggatgcaatgcagtat
gcctctgaatctaaagatactgaattggctgaagaactcctacagtggtttttgcaagaa
gaaaaaagggagtgctttggagcttgtctttttacctgttacgatcttctaaggcctgat
gttgtcctggaaactgcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatacttgacaaaggtggataaattagacgcttcagaatcactgagg
aaagaagaagaacaagctacggagacacaacctattgtttacggtcagccccagttgatg
ctgacagcaggacccagtgttgcagtccctccccaggcaccttttggytatggttatact
gcaccaccctatgggcagccacagcctggctttgggtacagcatgtga

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