KEGG   Sus scrofa (pig): 100511298
Entry
100511298         CDS       T01009                                 
Symbol
TFE3
Name
(RefSeq) transcription factor E3 isoform X1
  KO
K09105  transcription factor E3
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04137  Mitophagy - animal
ssc05202  Transcriptional misregulation in cancer
ssc05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100511298 (TFE3)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    100511298 (TFE3)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    100511298 (TFE3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100511298 (TFE3)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Ubiquitous bHLH-ZIP factors
    100511298 (TFE3)
SSDB
Motif
Pfam: MITF_TFEB_C_3_N DUF3371 HLH
Other DBs
NCBI-GeneID: 100511298
NCBI-ProteinID: XP_003135122
Ensembl: ENSSSCG00000012287
Vega: OTTSUSG00000004543
UniProt: F1RW57 A0A4X1T5N9
Position
X:complement(43100375..43116377)
AA seq 575 aa
MSHAAEPARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENILD
PDSFYELKSQPLSLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQL
MRAQAQEQERRERREQAAASSFPSPAPASPAISVVGVSAGGHTLGRPPPAQVPREVLKVQ
THLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGAASAQPLPAPEATHATGPT
GSAPNSPMALLTIGSNSEKEIDEVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSG
NLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRF
NINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLETRQRSLEQAN
RSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKPEQLDVEEEGRPGTATFHAA
GGPAQSAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGA
LSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtctcatgcggccgagccagctcgggacggcgtagaggccagcgcggagggccctcga
gccgtgttcgtgctgttggaggagcgcaggccggccgactcggcccagctgctcagcctg
aattctttgcttccggaatccgggattgttgctgacatcgaattagaaaacatcctcgat
cctgacagcttctacgagctcaaaagccaacccctatcattacggtcaagcctcccaata
tctctccaggccacaccagccaccccagctacactctctgcatcatcttctgcagggggc
tccaggacccctgccatgtcgtcatcttcttcatcgcgggtcttgctgcgacagcagcta
atgcgggcccaggcccaggagcaggagaggcgtgagcgtcgggaacaggctgcagcctct
tccttcccgagtcctgcacctgcctctcctgccatctctgtggtcggtgtctctgctggg
ggccacacactgggtcgtcctccccctgctcaggtgcccagggaggtgctcaaggtgcag
acccatctggagaacccgacacgctaccacctgcagcaggcacgccggcagcaggtgaaa
cagtacctgtccaccacccttgggcccaagctggcttcccaggccctcaccccaccgccg
ggggctgctagtgcccagccgctccccgcccctgaggccacccacgctactggccccaca
ggcagtgctcccaacagccccatggcgctgctcaccatcgggtctaactcagagaaggag
attgatgaagtcatcgatgagatcattagcctggagtccagttacaatgatgagatgctc
agctatctgcctggaggcaccacagggctgcagcttcccagcacgctgcctgtgtcaggg
aatctgctcgacgtgtacagtagtcagggtgtggccacgccagccatcaccgtcagcaac
tcctgtccagctgagctgcccaatatcaaacgggagatctctgagacggaggccaaggcc
cttttgaaggaacggcagaagaaagacaatcacaacctaattgaacgtcgcaggcgattc
aacattaacgacaggatcaaggagttgggcactctcatccccaagtccagtgacccggag
atgcgctggaacaagggcaccatcctgaaagcctcggtggattatatccgcaaattgcag
aaggagcagcagcgctccaaagacctggagacccggcagcgatccctggagcaagccaac
cgcagcctgcagctccgaattcaggagttagaactgcaggcccagatccatggtctgcca
gtacctcccaccccagggctgctctcgctggccacaacttcagcctctgatagcctcaag
ccagagcagctggatgttgaagaggagggcaggccaggcacagcaacgtttcatgcggcc
gggggacctgcccagagcgctccccatcagcagcccccagcgccaccctccgatgccctt
ctggacctgcactttcccagcgaccacctaggggatctgggagaccccttccacctgggg
ctggaggacattctgatggaggaggaggagggggtggtggggggactgtcagggggcgcc
ctatccccactgcgggctgcctccgatcccctgctttcttcagtatcccccgctgtctcc
aaggccagcagtcgccgcagcagcttcagcatggaggaggagtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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