KEGG T01009: 100512219

Sus scrofa (pig): 100512219

Entry

100512219 CDS T01009

Gene name

POM121C

Definition

POM121 transmembrane nucleoporin C

Orthology

K14316

nuclear pore complex protein Nup121

Organism

ssc Sus scrofa (pig)

Pathway

ssc03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:ssc03013]

SSDB

Motif

Pfam:

POM121

Other DBs

NCBI-GI:

335284218

NCBI-GeneID:

100512219

Ensembl:

ENSSSCG00000007705

Position

AA seq 1217 aa
MSPAAAAAGRGDRRRLIASVRDGRARGWGCGGPAGAALLGLSLLGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRSSRAFSSLVRNARRQRTLLASPPAKSAVNGNLLEPRSLLEGPDP
AELLLMGSYLGKPGPPQPASTPEARDVRERPGRRPPARTAAPALSAHPHRVHTQPSLPTP
LLRPSRRPSHRDCGTLSHRFVITPRRRYPIQQAQYSLLGVLPTVCWNGCHKKTVLSARNS
KMVCSPVTVRIAPPDSKLIRSPLPEQVISSTLSSPSTSTPDPCAKETVLSALKERKKRTV
EEEDQIFADGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHL
NKRSRTSSLSSLTSTYTGGIPSSSRNAITSSYSSTRGLSQLWKRSGPSSSPFSSPASSRS
QTPERPAKKIREEELSHHSSSSTPLVTDRESQGEKVADTTTWKKQNSWNSPSTPGSSGQR
KRKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKASLQWFNKILEDKTDTASTSVPE
SPPTSQPSFTFTLPAAGTAVPTTSLPAPSTNPLLESLKKMQNSPGLPSLPESAGMATTVA
HSPPKTPSPLAPLGSSQSGPLPGTSSDSKPTATFLGLTPASSPGPVTDTTKSSPAPQAET
SAKSQAPSAPSPTPKQNIPFGMLSTPTANPPASAAPAVSSASPMFSPVFPPPPKSESEGP
LPSSPSKVTATASSSSALPTTTSSPSLTFKPVFSPMGPPASVPTITPFSFKQTAPPATTT
STPLFTGQASATPAVASVTTASTSTDSALKPTFSFCVSSVTSTPSSVTSTTASTSQLFLF
GTPPASGASFTPAMGSIFQFGKPPAMPASTAVTTFGPSLPSAAQTAASSSTTGFSGFGST
LTASAPATTSQPTLTFSSTTTPAFNIPFGSSAKPSLPSYPGANPQPSFGATDGQQQGAAK
PTLVPTFGSSFTFGNSAASAPTATPAPAPAPVQPTFGSTTQSAFGGLKATASGFGTAAST
QPAFGSTTAVFSFGAATTSGFGAATQTTSSGTSSSVFGSTTPSPFTFGGSAAPAGSGGFG
ISVATPGTSSASGAFSFGAGQSGPAGSTTPFGGGLSQNSLGVPSQNTSFAFNVASTPDSK
PVFGGTSTPTFGQNAPAPGVGTSGSSLSFGASSTPTQGFVGVGPFGSAAPSFSIGAGSKP
PGARQRLQARRQHTRKK

NT seq 3654 nt +upstreamnt +downstreamnt
atgtctccggcagctgcggcggctggaagaggcgaccggcggcggctgatagcgagtgtc
agggacggtcgggcccggggctggggctgcggagggccggcaggggcggcgctgctcggc
ctgtcgctgctcggcctcgtgctgtacctggtgccggcggcggctgcgctggcctggcta
gctgtgggggctaccgcggcctggtggggactgagccgcgagccccgaagttcgcgcgcc
ttctcctcgctcgttcggaacgcgcgccgtcagcgaacactgctcgcctcgcccccggcc
aagtcggcagtaaacggaaatcttctagagccgcggagcttactcgaaggacctgacccc
gctgaactgctcctcatgggcagttacctgggcaagcccggccccccgcagcccgcctcc
accccggaggccagggacgtgcgggagaggcccggccgccgcccacctgcccgcaccgcg
gcgccagctctatcagcccatccccaccgcgttcatactcaaccctccctccccactcct
cttctccgaccctctaggaggccttcccaccgggattgtgggactttatcacatcggttt
gtaataacacctcgaagaagatatccaatccagcaggcccaatattccttgctgggggta
cttcccaccgtgtgctggaatggttgccacaagaagactgtgctatccgctcgcaattcc
aaaatggtgtgcagcccagtgacagtgaggattgctcccccggatagcaaattgattcgt
tcccctctaccagagcaggttatcagctcaacactgtcctcaccatcaactagtacccca
gacccatgtgcgaaggagactgtgctgagtgccctcaaagagaggaagaaaaggacagtg
gaggaagaagaccaaatatttgctgatggccaggaaaataaaagaaggcgccacgatagc
agtgggagtggacattcagcatttgagccgctggtggccaatggagtccctgcctctttt
gtgcctaagcctgggtctctgaagagaggtctcaattcccagagctcagatgaccactta
aataagagatcgcgcacctcttctctgagctccttgacaagcacgtacacaggcggcatc
cccagctccagccgcaatgccattaccagttcttacagttctactcgaggtctctctcag
ctgtggaagaggagtggtcctagttcatctcccttctccagccccgcttcatcccgctcc
cagacgccagagaggccagcaaagaaaataagagaagaggaactttctcatcattctagc
tcttccacgccactggtaacagacagggagtcccagggagagaaggttgcagatacaacc
acatggaagaaacagaactcatggaattccccatcgacacctggcagctcagggcagcgg
aaacggaaagttcagctgctgccgtcccggcgaggggaccagctgaccttgcctccacct
ccccagcttggttattcaatcactgctgaagacttagacttggaaaagaaagcttcgtta
cagtggttcaacaagatcttggaggataagactgatactgcctcgacctctgtccctgag
agcccacctaccagtcagccttccttcacttttaccctgcctgctgctgggactgctgtc
cccacaacctccctcccagccccaagcactaacccactgttggagagcttgaagaagatg
cagaactccccaggcctaccatccctccctgaatctgctggcatggcaaccactgtggcc
cattcacctccgaagacacccagccctctggcccctcttggctcttcacagtcagggcct
cttccgggcacctcctcagactccaaacctacagccactttcttgggactgacccctgct
tcttcccctggaccagtcactgacaccaccaagtcatctccggcccctcaggctgagaca
tctgccaaatcccaagccccgtccgccccatcccccacccccaagcagaacattcctttt
ggaatgctgagcacccccactgctaaccctcctgcctctgcagctcctgctgtgtcttca
gcatctcccatgttcagtcccgttttcccaccccctcccaaaagcgagagtgaaggcccc
ttgccctctagcccttccaaggtcacagccacagcatcctccagctcagccctccccacg
actaccagcagcccatccctcaccttcaaacctgtctttagccccatggggccacctgca
tctgtgcccacaataacccccttctccttcaagcaaacagctcctccagccactactacg
agcacccctctcttcaccggccaggccagtgccactcctgcagtggcttctgtgaccaca
gccagcacctccacagactctgctctgaagcccacgttcagcttctgtgtgagcagcgtg
accagcaccccaagcagcgtgactagcaccactgcttccacctcccagctcttcctcttt
gggactccccctgcctctggtgccagcttcaccccagctatgggctccatattccagttt
ggcaagcctcctgccatgcctgcttcaacagcagtcaccacctttggcccgtcccttccc
agtgctgctcagacagccgccagcagcagcaccactggctttagtggttttggcagcacc
cttacagcctccgccccggccaccaccagccagcccacactgacattcagtagcaccacc
accccggcattcaacattccctttggctcaagtgccaagccctccctcccatcataccca
ggagccaacccccagcccagcttcggagccactgatgggcagcagcagggggctgccaag
ccaacccttgtccccacctttggcagctccttcacatttggaaactctgcagcctccgcc
ccgactgcaacgccagcgccagccccagccccagtccagccgacctttggcagcaccaca
cagtccgctttcggcggcctgaaagccacagcctctggcttcggcaccgctgccagcacc
cagccagcctttggcagcaccacagccgttttctcctttggtgcagccaccacctctggc
tttggagctgcaacccagaccaccagcagtgggaccagtagctctgtgtttggcagcacg
acgccatctcccttcacatttgggggatcggcagccccagcgggcagtggaggctttggc
atcagtgtggctaccccaggcaccagctctgcctctggagccttcagcttcggagcagga
cagagtgggcctgctggcagcacgaccccttttgggggaggcttgagccagaacagcctg
ggcgtgcccagccagaacacgtcctttgccttcaatgtggccagcacgccggacagcaaa
cctgtgtttggaggcacctccacgcccacctttggccagaacgcccctgctcctggggtg
ggcacgtcaggcagcagcctctcctttggggcatcctcaacacccacccagggctttgtt
ggagtcggacctttcggatctgcggccccttccttttccattggtgcgggatccaagcct
ccgggggctcggcaacggctacaggcccggaggcagcacactcgcaagaagtag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-SSC (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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