KEGG   Sus scrofa (pig): 100512219Help
Entry
100512219         CDS       T01009                                 

Gene name
POM121C
Definition
POM121 transmembrane nucleoporin C
Orthology
K14316  
nuclear pore complex protein Nup121
Organism
ssc  Sus scrofa (pig)
Pathway
RNA transport
Module
Nuclear pore complex
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Genetic Information Processing
  Translation
   03013 RNA transport
    100512219 (POM121C)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
3
AA seq 1217 aa AA seqDB search
MSPAAAAAGRGDRRRLIASVRDGRARGWGCGGPAGAALLGLSLLGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRSSRAFSSLVRNARRQRTLLASPPAKSAVNGNLLEPRSLLEGPDP
AELLLMGSYLGKPGPPQPASTPEARDVRERPGRRPPARTAAPALSAHPHRVHTQPSLPTP
LLRPSRRPSHRDCGTLSHRFVITPRRRYPIQQAQYSLLGVLPTVCWNGCHKKTVLSARNS
KMVCSPVTVRIAPPDSKLIRSPLPEQVISSTLSSPSTSTPDPCAKETVLSALKERKKRTV
EEEDQIFADGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHL
NKRSRTSSLSSLTSTYTGGIPSSSRNAITSSYSSTRGLSQLWKRSGPSSSPFSSPASSRS
QTPERPAKKIREEELSHHSSSSTPLVTDRESQGEKVADTTTWKKQNSWNSPSTPGSSGQR
KRKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKASLQWFNKILEDKTDTASTSVPE
SPPTSQPSFTFTLPAAGTAVPTTSLPAPSTNPLLESLKKMQNSPGLPSLPESAGMATTVA
HSPPKTPSPLAPLGSSQSGPLPGTSSDSKPTATFLGLTPASSPGPVTDTTKSSPAPQAET
SAKSQAPSAPSPTPKQNIPFGMLSTPTANPPASAAPAVSSASPMFSPVFPPPPKSESEGP
LPSSPSKVTATASSSSALPTTTSSPSLTFKPVFSPMGPPASVPTITPFSFKQTAPPATTT
STPLFTGQASATPAVASVTTASTSTDSALKPTFSFCVSSVTSTPSSVTSTTASTSQLFLF
GTPPASGASFTPAMGSIFQFGKPPAMPASTAVTTFGPSLPSAAQTAASSSTTGFSGFGST
LTASAPATTSQPTLTFSSTTTPAFNIPFGSSAKPSLPSYPGANPQPSFGATDGQQQGAAK
PTLVPTFGSSFTFGNSAASAPTATPAPAPAPVQPTFGSTTQSAFGGLKATASGFGTAAST
QPAFGSTTAVFSFGAATTSGFGAATQTTSSGTSSSVFGSTTPSPFTFGGSAAPAGSGGFG
ISVATPGTSSASGAFSFGAGQSGPAGSTTPFGGGLSQNSLGVPSQNTSFAFNVASTPDSK
PVFGGTSTPTFGQNAPAPGVGTSGSSLSFGASSTPTQGFVGVGPFGSAAPSFSIGAGSKP
PGARQRLQARRQHTRKK
NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt
atgtctccggcagctgcggcggctggaagaggcgaccggcggcggctgatagcgagtgtc
agggacggtcgggcccggggctggggctgcggagggccggcaggggcggcgctgctcggc
ctgtcgctgctcggcctcgtgctgtacctggtgccggcggcggctgcgctggcctggcta
gctgtgggggctaccgcggcctggtggggactgagccgcgagccccgaagttcgcgcgcc
ttctcctcgctcgttcggaacgcgcgccgtcagcgaacactgctcgcctcgcccccggcc
aagtcggcagtaaacggaaatcttctagagccgcggagcttactcgaaggacctgacccc
gctgaactgctcctcatgggcagttacctgggcaagcccggccccccgcagcccgcctcc
accccggaggccagggacgtgcgggagaggcccggccgccgcccacctgcccgcaccgcg
gcgccagctctatcagcccatccccaccgcgttcatactcaaccctccctccccactcct
cttctccgaccctctaggaggccttcccaccgggattgtgggactttatcacatcggttt
gtaataacacctcgaagaagatatccaatccagcaggcccaatattccttgctgggggta
cttcccaccgtgtgctggaatggttgccacaagaagactgtgctatccgctcgcaattcc
aaaatggtgtgcagcccagtgacagtgaggattgctcccccggatagcaaattgattcgt
tcccctctaccagagcaggttatcagctcaacactgtcctcaccatcaactagtacccca
gacccatgtgcgaaggagactgtgctgagtgccctcaaagagaggaagaaaaggacagtg
gaggaagaagaccaaatatttgctgatggccaggaaaataaaagaaggcgccacgatagc
agtgggagtggacattcagcatttgagccgctggtggccaatggagtccctgcctctttt
gtgcctaagcctgggtctctgaagagaggtctcaattcccagagctcagatgaccactta
aataagagatcgcgcacctcttctctgagctccttgacaagcacgtacacaggcggcatc
cccagctccagccgcaatgccattaccagttcttacagttctactcgaggtctctctcag
ctgtggaagaggagtggtcctagttcatctcccttctccagccccgcttcatcccgctcc
cagacgccagagaggccagcaaagaaaataagagaagaggaactttctcatcattctagc
tcttccacgccactggtaacagacagggagtcccagggagagaaggttgcagatacaacc
acatggaagaaacagaactcatggaattccccatcgacacctggcagctcagggcagcgg
aaacggaaagttcagctgctgccgtcccggcgaggggaccagctgaccttgcctccacct
ccccagcttggttattcaatcactgctgaagacttagacttggaaaagaaagcttcgtta
cagtggttcaacaagatcttggaggataagactgatactgcctcgacctctgtccctgag
agcccacctaccagtcagccttccttcacttttaccctgcctgctgctgggactgctgtc
cccacaacctccctcccagccccaagcactaacccactgttggagagcttgaagaagatg
cagaactccccaggcctaccatccctccctgaatctgctggcatggcaaccactgtggcc
cattcacctccgaagacacccagccctctggcccctcttggctcttcacagtcagggcct
cttccgggcacctcctcagactccaaacctacagccactttcttgggactgacccctgct
tcttcccctggaccagtcactgacaccaccaagtcatctccggcccctcaggctgagaca
tctgccaaatcccaagccccgtccgccccatcccccacccccaagcagaacattcctttt
ggaatgctgagcacccccactgctaaccctcctgcctctgcagctcctgctgtgtcttca
gcatctcccatgttcagtcccgttttcccaccccctcccaaaagcgagagtgaaggcccc
ttgccctctagcccttccaaggtcacagccacagcatcctccagctcagccctccccacg
actaccagcagcccatccctcaccttcaaacctgtctttagccccatggggccacctgca
tctgtgcccacaataacccccttctccttcaagcaaacagctcctccagccactactacg
agcacccctctcttcaccggccaggccagtgccactcctgcagtggcttctgtgaccaca
gccagcacctccacagactctgctctgaagcccacgttcagcttctgtgtgagcagcgtg
accagcaccccaagcagcgtgactagcaccactgcttccacctcccagctcttcctcttt
gggactccccctgcctctggtgccagcttcaccccagctatgggctccatattccagttt
ggcaagcctcctgccatgcctgcttcaacagcagtcaccacctttggcccgtcccttccc
agtgctgctcagacagccgccagcagcagcaccactggctttagtggttttggcagcacc
cttacagcctccgccccggccaccaccagccagcccacactgacattcagtagcaccacc
accccggcattcaacattccctttggctcaagtgccaagccctccctcccatcataccca
ggagccaacccccagcccagcttcggagccactgatgggcagcagcagggggctgccaag
ccaacccttgtccccacctttggcagctccttcacatttggaaactctgcagcctccgcc
ccgactgcaacgccagcgccagccccagccccagtccagccgacctttggcagcaccaca
cagtccgctttcggcggcctgaaagccacagcctctggcttcggcaccgctgccagcacc
cagccagcctttggcagcaccacagccgttttctcctttggtgcagccaccacctctggc
tttggagctgcaacccagaccaccagcagtgggaccagtagctctgtgtttggcagcacg
acgccatctcccttcacatttgggggatcggcagccccagcgggcagtggaggctttggc
atcagtgtggctaccccaggcaccagctctgcctctggagccttcagcttcggagcagga
cagagtgggcctgctggcagcacgaccccttttgggggaggcttgagccagaacagcctg
ggcgtgcccagccagaacacgtcctttgccttcaatgtggccagcacgccggacagcaaa
cctgtgtttggaggcacctccacgcccacctttggccagaacgcccctgctcctggggtg
ggcacgtcaggcagcagcctctcctttggggcatcctcaacacccacccagggctttgtt
ggagtcggacctttcggatctgcggccccttccttttccattggtgcgggatccaagcct
ccgggggctcggcaacggctacaggcccggaggcagcacactcgcaagaagtag

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