KEGG T01009: 100513412

Sus scrofa (pig): 100513412

Entry

100513412 CDS T01009

Gene name

ACTN1

Definition

actinin, alpha 1

Orthology

K05699

actinin alpha

Organism

ssc Sus scrofa (pig)

Pathway

ssc04510	Focal adhesion
ssc04520	Adherens junction
ssc04530	Tight junction
ssc04670	Leukocyte transendothelial migration
ssc04810	Regulation of actin cytoskeleton
ssc05146	Amoebiasis
ssc05203	Viral carcinogenesis
ssc05322	Systemic lupus erythematosus
ssc05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)

Class

Cellular Processes; Cell motility; Regulation of actin cytoskeleton [PATH:ssc04810]
Cellular Processes; Cell communication; Focal adhesion [PATH:ssc04510]
Cellular Processes; Cell communication; Adherens junction [PATH:ssc04520]
Cellular Processes; Cell communication; Tight junction [PATH:ssc04530]
Organismal Systems; Immune system; Leukocyte transendothelial migration [PATH:ssc04670]
Human Diseases; Cancers; Viral carcinogenesis [PATH:ssc05203]
Human Diseases; Immune diseases; Systemic lupus erythematosus [PATH:ssc05322]
Human Diseases; Cardiovascular diseases; Arrhythmogenic right ventricular cardiomyopathy (ARVC) [PATH:ssc05412]
Human Diseases; Infectious diseases; Amoebiasis [PATH:ssc05146]

SSDB

Motif

Pfam:

Spectrin CH EFhand_Ca_insen CAMSAP_CH EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7

Other DBs

NCBI-GI:

340007404

NCBI-GeneID:

100513412

Position

AA seq 887 aa
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDTDDFRACLISMGY
NMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITV
DELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL

NT seq 2664 nt +upstreamnt +downstreamnt
atggaccattatgattcccagcaaaccaacgactacatgcagcccgaagaggactgggat
cgagatctgctcctggacccagcctgggagaagcagcagagaaagacattcacagcatgg
tgcaactcccacctccggaaggcaggcacgcagatcgagaacatcgaggaggacttccgg
gacggcctgaagctgatgctgctgctggaggtcatctcaggtgaacgcctggccaagccg
gagagaggcaagatgagagtgcacaagatttccaacgtcaacaaggccttggacttcata
gccagcaagggcgtcaagctggtgtccataggagccgaagaaatcgtggatgggaacgtg
aaaatgaccctgggcatgatctggaccatcatcctccgctttgccatccaggacatctcc
gtggaagagacttcggccaaggaaggactgctcttgtggtgtcagagaaagacagcccct
tacaagaatgtcaatatccagaacttccacataagctggaaggacggcctgggcttctgt
gccttgatccaccgacaccggcctgagctgattgactatgggaagctgcggaaggatgac
ccactgacaaatctgaacacggccttcgatgtggcagagaagtacctggacatcccgaag
atgctggatgcggaagacatcgtcggaactgcccgtcctgatgagaaagctatcatgact
tatgtatccagcttctaccacgccttctctggagcccagaaggccgagacagcagccaat
cgcatctgcaaggtgctggccgtcaaccaggagaatgagcagctcatggaagactacgag
aagctggccagcgatctgctggagtggatccgccgcaccatcccctggctggagaaccgg
gcgcccgagaacaccatgcatgccatgcagcagaagctggaggacttccgtgactaccgg
cgcctgcacaagccccccaaggtgcaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaagctgcgcctcagcaaccggcctgccttcatgccctccgagggcaggatg
gtctcggacatcaacaatgcctggggctgcctggagcaggcggagaagggctatgaggag
tggctgctgaatgagatccggaggctggagaggcttgaccacctggcagagaagttccgg
cagaaggcctccatccacgaggcctggacggatggcaaagaggccatgctgcggcagaag
gattacgagacggccaccctctcggagatcaaggccctgctcaagaagcacgaggccttc
gagagcgacctggccgcccaccaggaccgcgtggagcagatcgctgccatcgcgcaggag
ctcaatgagctggactattacgactcacccagtgtcaatgcccggtgccaaaagatctgt
gaccagtgggacaatctgggggccctgacccagaagcggagggaagctctggagcggaca
gagaaactgctggagaccattgaccagctgtacctggagtacgccaagcgggccgcgccc
ttcaacaattggatggagggggccatggaggacctgcaggacaccttcatcgtgcacacc
atcgaggagatccagggactgaccacagcccatgagcagttcaaggccaccctccctgat
gccgacaaggagcgcctggccatcctgggcattcacaatgaggtgtccaagattgtccag
acctaccacgtcaacatggcgggcaccaacccctacacaaccatcacgcctcaggagatc
aatggcaaatgggaccacgtgcggcagctggtgccgcggagggaccaggccctgacggag
gagcatgcccgccagcagcacaacgagaggctacgcaagcagtttggggcgcaggccaat
gtcatcgggccctggatccagaccaagatggaggagatcgggaggatctccatcgagatg
cacgggaccctggaggaccagctcagccacctgcggcagtacgagaagagcattgtcaac
tacaagcccaagatcgaccagctggagggcgaccaccagctcatccaggaggcgctcatc
ttcgacaacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagctc
ctcaccaccatcgccaggaccatcaatgaggtggagaaccagatcctgaccagggatgcc
aagggcatcagccaggagcagatgaacgagttccgggcctccttcaaccactttgaccgg
aagaagacaggcatgatggacacggatgatttccgcgcctgcctgatctccatgggttac
aacatgggagaggcggaatttgcccgcatcatgagcattgtggaccccaaccgcctgggg
gtagtgacgttccaggccttcatcgatttcatgtcccgtgagacggccgacacggataca
gcagatcaagtcatggcttccttcaagatcctggctggggacaagaattacatcacggtg
gacgagctgcgccgtgagctgccgcctgaccaggccgagtactgcattgcgagaatggcc
ccgtacaccggccccgacgccgtgcccggtgctctggactacatgtccttctccacagcg
ctgtacggcgagagtgacctctaa

All links

Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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