KEGG   Sus scrofa (pig): 100513840Help
Entry
100513840         CDS       T01009                                 

Gene name
TRAF2
Definition
TNF receptor-associated factor 2
Orthology
K03173  
TNF receptor-associated factor 2
Organism
ssc  Sus scrofa (pig)
Pathway
MAPK signaling pathway
NF-kappa B signaling pathway
Protein processing in endoplasmic reticulum
Apoptosis
Osteoclast differentiation
RIG-I-like receptor signaling pathway
TNF signaling pathway
Adipocytokine signaling pathway
Non-alcoholic fatty liver disease (NAFLD)
Hepatitis C
Herpes simplex infection
Epstein-Barr virus infection
Pathways in cancer
Viral carcinogenesis
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Genetic Information Processing
  Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100513840 (TRAF2)
 Environmental Information Processing
  Signal transduction
   04010 MAPK signaling pathway
    100513840 (TRAF2)
   04064 NF-kappa B signaling pathway
    100513840 (TRAF2)
   04668 TNF signaling pathway
    100513840 (TRAF2)
 Cellular Processes
  Cell growth and death
   04210 Apoptosis
    100513840 (TRAF2)
 Organismal Systems
  Immune system
   04622 RIG-I-like receptor signaling pathway
    100513840 (TRAF2)
  Endocrine system
   04920 Adipocytokine signaling pathway
    100513840 (TRAF2)
  Development
   04380 Osteoclast differentiation
    100513840 (TRAF2)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100513840 (TRAF2)
   05203 Viral carcinogenesis
    100513840 (TRAF2)
   05222 Small cell lung cancer
    100513840 (TRAF2)
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    100513840 (TRAF2)
  Infectious diseases
   05160 Hepatitis C
    100513840 (TRAF2)
   05168 Herpes simplex infection
    100513840 (TRAF2)
   05169 Epstein-Barr virus infection
    100513840 (TRAF2)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100513840 (TRAF2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
1
AA seq 520 aa AA seqDB search
MAAASVTPPGSLDLLQPGFSKTLLGTKLEDKYLCSACRNVLRRPFQAQCGHRYCSYCLSN
ILSSGPQNCAACVHEGIYEEGVSILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE
YESCHEGHCPFVLTECPACKGLVRLGEKERHLGQECPERSLSCRHCRAPCCSANMKAHLQ
VCPKFPLTCDGCGKKKISREKFQDHVRTCGRCRVPCRFHAVGCPEMVESEKQQEHEAQRL
REHLGLLLGVFLEARPSPGGGQPFLGQSEGSWEGGGPGLGPSKAAELLQRCEALERKTAT
FENIVCVLNREVERVAMTAEACGRQHRLDQDRIEALSNKVQQLERSIGLKDLAVADLEQK
VQELQASTFDGVFIWKISDFARKRQEAVAGRAPAIFSPAFYTSRYGYKMCLRAYLNGDGT
GRGTHLSLFFVLMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVSSSSFQRPVG
DMNIASGCPLFCPVSRMEARSSYVRDDAIFIKAIVDLTGL
NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt
atggctgcagccagcgtgacccctcccggctccctggacttgctgcagcctggcttctcc
aagacgctgctggggaccaagctggaggacaagtacctgtgctcggcctgcaggaacgtt
ctccgcaggcccttccaggcccagtgcggccaccgctactgctcctactgcctgagcaac
atcctgagctccgggccccagaactgtgcggcctgcgttcacgagggcatttatgaagaa
ggcgtttctatcctggagagcagctcggctttcccggacaatgccgcccgcagggaggtg
gagagcctgccggccgtctgtcccagtgacggctgcacctggaaggggaccctgaaagag
tacgagagctgccacgaaggacactgcccgttcgtgctgaccgagtgcccggcgtgtaaa
ggcctggtccgcctgggcgagaaggagcgccacctggggcaggagtgcccggagcgcagc
ctcagctgccgccactgccgggcgccctgctgctcggccaacatgaaggctcacctccag
gtctgccccaagttccctctgacctgcgacggctgcggcaagaagaagatctcccgcgag
aagtttcaggaccacgtcaggacgtgtggcaggtgccgcgtcccgtgcaggttccacgcg
gtcggctgtcccgagatggtggagagtgagaagcagcaggagcacgaggcgcagcggctc
cgggaacacctgggcctgctgctgggcgtcttcctggaggccaggccctcccccggcggc
ggccagcccttcctcggccagagcgaggggtcctgggaggggggcgggccaggcctgggg
ccctccaaggccgccgagctgctgcagaggtgcgaggccctggagcgcaagacggcgacc
ttcgagaacatcgtctgcgtgctgaaccgggaggtggagcgcgtggccatgaccgccgag
gcctgcggccggcagcaccggctggaccaggacaggatcgaagccctgagcaacaaggtg
cagcagctggagaggagcatcggcctgaaggacctggccgtggccgacctggagcagaag
gtccaggagctgcaggcctccaccttcgatggcgtcttcatctggaagatctccgacttc
gccaggaagcgccaggaggccgtggccggccgcgcgcccgccatcttctccccagccttc
tacacgagcaggtacggctacaagatgtgtctgcgcgcctacctgaacggggacggcacg
ggccgcgggacgcacctgtctctcttcttcgtgctgatgaagggccccaacgacgccctc
ctgcggtggcccttcaaccagaaggtgaccctgatgctgctggaccagaacaaccgggag
cacgtgatcgatgccttcagacccgacgtgagctcgtcctccttccagaggccggtgggg
gacatgaacatcgccagcggctgcccgctcttctgccccgtctccaggatggaggccagg
agctcctacgtgcgcgacgacgccatcttcatcaaggccatcgtggacctgacggggctc
tag

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