KEGG   Sus scrofa (pig): 100515028
Entry
100515028         CDS       T01009                                 
Symbol
DDX11
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
  KO
K11273  chromosome transmission fidelity protein 1 [EC:5.6.2.7]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100515028 (DDX11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100515028 (DDX11)
Enzymes [BR:ssc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100515028 (DDX11)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    100515028 (DDX11)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD
Other DBs
NCBI-GeneID: 100515028
NCBI-ProteinID: XP_020948119
Ensembl: ENSSSCG00000000745 ENSSSCG00000000747
Position
5:67359399..67395739
AA seq 904 aa
MADKTQEPGGIHFPFPFTPYPIQKDFMAALYQVLEAGKIGIFESPTGTGKSLSLICGALS
WLRDFEQKKRQEEARLLEAEATAAPLSNGKDPLLLPLASQGTLGPPKDPAEPDWVTQFVQ
KKEERDLVDRLKEEQVRRRKREERLQQIRHNAQLKYAAKRMRQEDEETERLLDLSREMLA
AGSEPEQLASEEEELVLAEYESDEEKRKASGADEDEDDLEEEHVTKIYYCSRTHSQLAQF
VHEVQRSPFGKDTRLVSLGSRQNLCVNDDVRKLGSVQLINDRCVDMQRSRREKSIAEEAK
PRRRKQEQRTACPFYSHERLQLLRDEVLVGAKDIEQLVALGKEARACPYYGSRFAIPAAQ
LVVLPYQMVLHAATRQAAGIRLQGQVVLVDEAHNLMDTITGIHSVEVSGSQLCQAHSQLL
QYMERYGKRLKAKNLMYIKQILYLLEKFVAVLGGNVKQNPNTQSLSQAGTELKTINDFLF
QSQIDNINLFKVQRYCEKSMISRKLLGFTERYGAVLASPREQPRLAGFQHFLQSLQPGVT
EAPAAPVEEEEAGAPRPASPLMHIEGFLAALTTANQDGRVILSRQGSLSQSSLKFLLLNP
AVHFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLV
ICSGPANQQLEFTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEYQRQVHAHWDR
SGLLARLAVRKKIFQEPKRANQVEQVLKEYSRCIKHCGQAEGMVTGALLLSVVGGKMSEG
INFSDSLGRCVVMVGMPYPNIRSAELQEKMAYLDQTLPRAPGQAAPGKALVENLCMKAVN
QSIGRAIRHQKDFASIVLLDQRYARPPILAKLPAWIRDRVEVKATFGPAFAALRKFHREK
CGSS
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggctgacaaaacccaggagcctggtggcatccacttcccttttcccttcacaccctat
cccatccagaaggacttcatggcagctctctaccaggtgttggaggctggcaagattggg
atatttgagagtccaaccggcactggaaagtccctgagtcttatttgtggggccctctcc
tggctccgcgactttgaacaaaagaagcgtcaggaggaggcgcgtctccttgaggctgaa
gccacagctgcccccttgagcaatgggaaggacccgctcctgcttcccctggcctcccag
gggaccttaggccccccaaaagaccctgcagagcccgactgggtcactcagtttgtgcag
aagaaagaagagagggacctggtggaccgcctgaaggaggagcaggtcaggaggaggaag
cgagaagagcgcctacagcagatccgccacaatgcacagctcaagtatgcagccaagcgt
atgagacaggaagatgaggaaaccgagcgtctcctcgacctcagcagggagatgctggcg
gcgggctcagagcctgagcagctggcctcagaggaggaggagctggtcctcgccgagtac
gagagtgacgaggagaaaagaaaggctagtggagcagatgaggacgaggatgacctggag
gaggagcacgtgactaagatttactactgcagccggacacactcccagctggcccagttt
gtgcacgaggtgcagagaagccccttcggcaaagacacgcggcttgtctccctgggctct
cggcagaacctttgtgtcaatgacgacgtgaggaagctgggctccgtgcagctcatcaat
gaccgctgcgtggacatgcagaggagcagacgcgagaagagcatcgctgaggaggcgaag
cccaggaggaggaagcaggaacagcggactgcctgccccttctacagccacgagcgactg
cagctcctccgggacgaggtcctggtcggggcaaaggacattgagcagctggtggccctg
ggaaaggaggctcgggcctgtccttattacgggagcaggttcgccattcccgcagcgcag
ctggtggtgctgccctaccagatggtgctgcacgcggccacacggcaggccgcggggatc
cggctacagggccaggtggtgctcgtcgacgaggcccacaacctgatggacaccatcacg
ggcatccacagcgtggaagtcagcggttcccagctctgccaggcccattcccagctgctc
cagtacatggaacgatatgggaagcgcttgaaggccaagaacctgatgtacatcaaacag
atcctgtatctgctggagaagttcgtggccgtgctgggcgggaacgttaagcaaaacccc
aatacccagagcctctcgcaggcagggacggagctgaagaccatcaacgacttcctcttc
cagagccagatcgacaacatcaacttgttcaaggttcagcgctactgtgaaaagagcatg
atcagcagaaagctcctcggcttcacagaacggtatggagcggtcctggcgtcccccagg
gaacagcccagactggctggcttccagcacttcctacagagtctgcagcctggggtgact
gaggctcctgcagcccctgtggaagaggaggaggccggggcgcctcggcctgcctccccg
ttgatgcacatcgagggcttccttgccgctctcaccactgccaaccaggacggcagggtc
attctgagccgccaaggcagcctcagtcagagcagcctcaaattcttgctcctgaatcca
gccgtgcactttgcccaggtggtgaaggaatgccgggcagtggtcatcgcggggggcacc
atgcagccggtgtctgacttccgggagcagctgctggcgtgtgccggggtggaagctgag
cgcgtggtggagttctcctgtggtcacgtgatccctccagacaacatcctgcccctcgtc
atctgcagcgggcctgccaaccagcagctggaattcacataccagaagagggagctgcca
cagatgatggatgagacgggacgcatcctctgtaacctgtgcaacgtggtcccaggcggg
gtggtctgtttcttcccttcctacgaataccagcgccaggtccatgcccactgggacagg
agcggcctgctggcccgcctggctgtcaggaagaagatatttcaggagcccaagagagca
aatcaggtggagcaggtgctgaaggagtattccaggtgcatcaagcactgtggccaggct
gagggcatggtgacaggggccctgctgctctccgtagttggagggaagatgagtgaaggc
atcaacttctcagacagccttggccggtgtgtggtcatggtgggcatgccctaccccaac
atcaggtctgcggagctgcaggagaagatggcttacctggatcagaccctccccagagcc
ccaggccaggctgcccccgggaaggcgctggtggagaacctgtgcatgaaggccgtcaac
cagtccataggcagggccatcaggcaccagaaggattttgccagcatcgtgctcctggac
cagcgctatgcccgcccacccatcctggcaaagctgcccgcctggatccgggaccgcgtg
gaggtcaaagccacctttggccctgcctttgcagctctgcgaaagtttcatcgtgagaag
tgtggctcttcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
Protein sequence (19)   
   RefSeq(pep) (19)   
DNA sequence (26)   
   RefSeq(nuc) (24)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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