KEGG   Sus scrofa (pig): 100515684Help
Entry
100515684         CDS       T01009                                 

Gene name
GRIN2C
Definition
glutamate receptor, ionotropic, N-methyl D-aspartate 2C
Orthology
K05211  
glutamate receptor ionotropic, NMDA 2C
Organism
ssc  Sus scrofa (pig)
Pathway
Calcium signaling pathway
Neuroactive ligand-receptor interaction
Circadian entrainment
Long-term potentiation
Glutamatergic synapse
Alzheimer's disease
Amyotrophic lateral sclerosis (ALS)
Cocaine addiction
Amphetamine addiction
Nicotine addiction
Alcoholism
Class
Environmental Information Processing; Signal transduction; Calcium signaling pathway [PATH:ssc04020]
Environmental Information Processing; Signaling molecules and interaction; Neuroactive ligand-receptor interaction [PATH:ssc04080]
Organismal Systems; Nervous system; Glutamatergic synapse [PATH:ssc04724]
Organismal Systems; Nervous system; Long-term potentiation [PATH:ssc04720]
Organismal Systems; Environmental adaptation; Circadian entrainment [PATH:ssc04713]
Human Diseases; Neurodegenerative diseases; Alzheimer's disease [PATH:ssc05010]
Human Diseases; Neurodegenerative diseases; Amyotrophic lateral sclerosis (ALS) [PATH:ssc05014]
Human Diseases; Substance dependence; Cocaine addiction [PATH:ssc05030]
Human Diseases; Substance dependence; Amphetamine addiction [PATH:ssc05031]
Human Diseases; Substance dependence; Nicotine addiction [PATH:ssc05033]
Human Diseases; Substance dependence; Alcoholism [PATH:ssc05034]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
12
AA seq 1208 aa AA seqDB search
MGGALGPALLLTSLLGAWAGPGPGQGEQALTVAVVFGSSGLPQAQARIRLTPQSFLDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGAAHVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKPLRHPRLQCLPSEGWCQAPHRHTPTSRAPRHPNRPRRAAPRKAEGET
VPLLRATITLMPVSTKGTEKSTISERSSLMGETPHLWVADGGGAGAAGGRPGGGPTSPIM
PFHTPLTLLPCLPLVTRPEGVIALPAAGHRVGHAAASARIRALHDDKRSLFQRGHRQRRC
RLRAITTMVGWTRYPPGLKEKSRPSQVTLSTICVLAVLSPRNPCHTLTPRSVLNLRNEDP
ERCQPVEGLPGRADGPGVAAAVPSRGGKGAVLAPVAVGAQGQDGHAVADLLAQAEAPALG
DDADEAHGEDGGGRVGTAQSQALGARAGPAGAQLQRKHVQQPPAQVAGVGDGTHALEEER
VARVQAGDDGERAPVVLLQHLEQHLQLLLQGHAQLQEGGARFLGAGREPYSPAVWVMMFV
MCLTVVAITVFTFEYFSPVSYNRNLTSGKKSGGPSFTIGKSVWLLWALVFNNSVPIENPR
GTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFG
TVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDE
GCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWLSGICQNE
KNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPNTSRLDFLLAFSR
GIYSCFSGVQSLASPARPPSPDVTASSAQASVLKMLQAARDMVTSAGVSSSLDRATRTIE
SWGGGGGRRAPPSPACPGPRPPTPSPARDPSPTGRGPPGGSRAALGRRVPQPPGGPPTSE
PSLPDVSRASGWRAREARWPVRAGSGCRRFSASERRALPERPLSPDRCHYSSFPRADRSG
RPFLPLFPEPPEPENLPLLGPEQLARREALLRAAWARGSRPRHASLPSSVAETFARPSSG
PARCARQACGRLTQAQSMRLPSYREACQEAVWAGALAWPHGPHACLHAHAHLPLCWGAVC
PHLPPCVSHGPWLPAAWRPPGHRDRTLGLSTGYRDSGGLEEVSRVACGVHGFPRPCAWRR
ISSLESEV
NT seq 3627 nt NT seq  +upstreamnt  +downstreamnt
atgggtggggccctggggccggccctgttgctcacctcactccttggggcctgggcaggg
ccaggcccagggcagggcgagcaggctctgacggtggccgtggtgtttggcagctcgggg
ctgccgcaggcccaggcccgtatccgcctgactccgcagagcttcctggacctgcccctg
gagatccagccgctcaccgtgggggtcaacaacaccaaccccagcagtcttctcacccag
atctgcgggctcctgggcgctgcccacgtccacggcatcgtctttgaggacaacgtgggc
acagaggccgtggcccagatcctcgacttcatctcctcccagacccacgtgcctatcctc
agcatcagtgggggctctgctgtggtcctcacccccaagcctctgaggcacccaaggctg
cagtgcttgccctctgagggctggtgccaggcaccgcaccgccacacacccacttctcgg
gcccctcggcaccccaaccgcccacgccgagccgcacccaggaaggccgagggggagacg
gtgccgttgctgcgtgccaccatcacgctgatgcccgtctccacgaagggcaccgagaag
tccacgatctcggagcgctcctcgttgatgggggaaacaccccacctgtgggtggctgat
ggagggggggccggggcagcaggcgggcggcctgggggcgggcctacctccccgatcatg
ccgttccacacgccgctcaccctcttgccgtgcttgccgttggtcaccagacctgaaggt
gtgattgctttgccggcggcagggcaccgtgttgggcacgcagccgccagtgccaggatc
agggctctccacgatgacaaaaggtcgctcttccagcgtggccaccgtcagaggcggtgc
cggttgagggcgatcaccaccatggtgggctggaccaggtacccaccagggctgaaggag
aagtcccggccctcccaggtgacattgagtaccatttgtgtacttgctgttctgtctccc
cgaaatccttgccacaccctcacaccccgctctgttctcaacttaagaaatgaagaccca
gagaggtgccaacctgtagaaggcctcccgggcagggctgacgggcccggggtggctgcg
gcagtccccagccggggcgggaagggcgccgtgctggcgccggtagctgtgggcgcccag
ggccaggatggccacgccgtcgcggaccttctggcgcaggctgaggcgccagctctcggt
gacgacgctgatgaggcccacggggaagacggcggggggcgcgtcggtactgcccagagc
caggcgctgggtgcgcgcgcgggtcccgccggggcccagctccagcgtaagcacgtccag
cagccgccagcccaggtagctggcgtcggcgacggcacgcacgccctcgaggaagagcgc
gtggcccgggtgcaggctggtgatgacggcgaacgcgctccagtcgtactcctccagcac
cttgaacagcacctgcagctgctgctccagggacacgcccagctgcaggaaggcggagcc
cggttcctgggggcggggcgggagccctacagccccgccgtgtgggtgatgatgtttgtc
atgtgtctcaccgtggtggccatcaccgtcttcacgtttgagtacttcagccccgtcagc
tacaaccggaacctcaccagcggcaagaagtccggaggcccgtccttcaccattggcaag
tccgtgtggctgctgtgggctctggtcttcaacaactcggtgcccatcgagaacccccgg
ggcaccactagcaagatcatggtcctggtctgggccttcttcgccgtcatcttcctcgcc
agctacaccgccaacctggccgccttcatgatccaggagcagtacatcgacaccgtgtct
ggcctcagtgacaagaagtttcagcggccgcaagatcagtacccacccttccgctttggc
acagtgcccaatggcagcacggagcggaacatccgcagcaactaccgcgacatgcacacc
cacatggtcaagttcaaccagcgctcggtggaggacgcgcttaccagcctcaagatgggg
aagctggatgccttcatctatgacgctgctgtcctcaactacatggcgggcaaggatgag
ggctgcaagctggtcaccattggctccggcaaggtctttgccaccaccggctatggcatc
gccatgcagaaggactcccactggaagcgggccatagacctggcgctcctgcagttcctg
ggggacggggagacccagaagctggagacggtgtggctctcggggatctgccagaacgag
aagaacgaggtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctacatg
ctgcttgtagccatggggctggccctgctggtcttcgcctgggagcacctggtgtactgg
aagctgcgccactcggtgcccaacacatcccggctggacttcctgctggctttcagcagg
ggcatctacagctgcttcagcggcgtgcagagcctggccagccccgcgcggccgcccagc
ccggacgtgacggccagctcagcccaggccagcgtgctcaagatgctgcaggcggcacgc
gacatggtgacctcagcgggcgtgagcagctccctggaccgcgccacgcgcaccatcgag
agctggggcggcggcggcggccgccgtgcgcccccgtcgcccgcctgccccggcccgcgg
ccacccacccccagtcctgcccgcgatccgagccccacgggtcgggggccaccaggcggg
agtcgcgccgcgctggggcgcagggtcccgcagcccccgggcggccccccgacgtccgag
ccctccctccccgacgtctcgcgggcgtcgggctggcgggcccgggaggcgcggtggcca
gtgcgggccgggagcggctgccggcgcttctcggcctccgagcggcgcgcgctcccggag
cgccccctgtcgccggatcgctgccactacagctccttccctcgagccgaccggtctggg
cgccccttcctcccgctcttcccggagcccccggagcccgagaacctgccgttgctcggg
ccggagcagctggcccggcgggaggccctcctgcgcgcggcctgggcccgggggtcgcgc
ccgcgccacgcttccctgcccagctcggtggccgagaccttcgcccggcccagctcgggg
cccgcccgctgtgcccgccaggcctgcgggcgcttgacgcaggcgcagtcgatgcggctg
ccgtcctaccgcgaggcctgccaggaggcggtgtgggcaggggccctcgcctggccgcac
ggaccgcacgcctgcctccacgcccatgcccacctgccactttgctggggcgctgtctgc
cctcacctcccaccctgtgtcagccacggcccctggctccctgcagcttggcggcctccg
gggcacagggacaggaccctagggctgagcacaggctacagggacagtggggggctggaa
gaggtcagcagggtggcctgtggggtgcacggcttcccccgaccttgcgcctggaggcgg
atctccagcttggagtcagaagtgtga

DBGET integrated database retrieval system