KEGG T01009: 100516821

Sus scrofa (pig): 100516821

Entry

100516821 CDS T01009

Gene name

HDAC9

Definition

histone deacetylase 9

Orthology

K11409

histone deacetylase 9 [EC:3.5.1.98]

Organism

ssc Sus scrofa (pig)

Pathway

ssc05034	Alcoholism
ssc05203	Viral carcinogenesis

Class

Human Diseases; Cancers; Viral carcinogenesis [PATH:ssc05203]
Human Diseases; Substance dependence; Alcoholism [PATH:ssc05034]

SSDB

Motif

Pfam:

HDAC4_Gln

Other DBs

NCBI-GI:

335295480

NCBI-GeneID:

100516821

Ensembl:

ENSSSCG00000015368

Position

AA seq 585 aa
MDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAE
FQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQL
PPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHTS
LDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLR
RKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPAGNVTENETSVLPPTPHAEKMV
SQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPAQLNASNSLKEKQKCETQTLRQGVPL
PGQYGGSIPASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLA
TKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMN
KLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACADDSLGQVGAV
KVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII

NT seq 1758 nt +upstreamnt +downstreamnt
atggatgtgaagtcagaggttcctgtgggcctggagcccatctcgcctttagacctaagg
acagacctcaggatgatgatgcctgtggtggaccctgttgtccgtgagaagcaactgcag
caggagttattgctcattcagcaacagcagcaaatccagaagcagctcttgattgcagag
tttcagaaacagcatgagaacttgacacggcagcatcaggctcaacttcaggagcacatc
aagttgcaacaggaacttctagccataaaacagcaacaagaactcctagaaaaggagcag
aaactggagcagcagaggcaagaacaggaagtagagaggcatcgcagagaacagcagctt
cctcctctcagaggcaaagatagaggacgagaaagggcagtggcaagtacagaagtaaag
cagaagcttcaagaattcctgttgagtaaatcagcaacaaaagacactccaactaatgga
aaaaatcattccgtgagccgccatcccaagctctggtacacggctgcccaccacacgtca
ttggatcaaagctctccacccctgagtggaacgtctccatcttacaaatacacattacca
ggagctcaagatgcaaaagatgatttcccccttcgaaaaactgcctctgagcccaacttg
aaggtgcggtccaggttaaaacagaaagtggcagagaggagaagcagccccttactcagg
cggaaggatggaaatgttgtcacttcattcaagaagcgaatgtttgaggtgacagaatcc
tcggtcagtagcagctctccggggtctggtcccagttcaccaaacaatgggccagctgga
aatgttactgaaaatgagacttcggttttgcctcctactcctcatgctgagaaaatggtt
tctcagcaacgcattctaattcacgaagattccatgaacctgctaagtctttatacctct
ccctctttgcccaacattaccttgggacttccagcagtgccagcccagctcaatgcttca
aattcactcaaagaaaaacagaagtgtgagacccagacactcaggcaaggtgttcctctg
cctgggcagtatgggggcagcatcccggcatcttccagccatccccatgtcactttggag
gggaagcccaacagcagccaccaagctctcctgcagcatttattactgaaagaacagatg
cgacagcaaaagcttcttgtggctggtggcgttcccttacatcctcagtctcccttggca
acaaaagagagaatttcacctggaattagaggtacccacaaattaccccgtcacagaccc
ctgaatcgaacccagtctgcacctttgcctcagagcacattggctcagctggtcattcag
cagcaacaccagcaattcttggagaagcagaagcaataccagcagcagatccacatgaac
aaactgctttcgaaatctattgaacaactgaagcaaccaggcagtcacctcgaggaagca
gaggaagagcttcagggggaccaggcgatgcaggaagacagagcgccctctagtggcaac
agcactaggagtgacagcagtgcttgtgcggatgactcactgggacaagttggggctgtg
aaggtcaaggaggaaccagtggacagtgatgaagatgctcagatccaggaaatggaatct
ggggagcaggctgcttttatgcaacaggtaataggcaaagatttagctccaggatttgta
attaaagtcattatctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   ENSEMBL-SSC (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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