KEGG   Sus scrofa (pig): 100517257
Entry
100517257         CDS       T01009                                 
Symbol
TAF7L
Name
(RefSeq) transcription initiation factor TFIID subunit 7-like isoform X2
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100517257 (TAF7L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100517257 (TAF7L)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100517257 (TAF7L)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100517257 (TAF7L)
   Coactivators
    SAGA/TFTC/STAGA complex
     100517257 (TAF7L)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     100517257 (TAF7L)
SSDB
Motif
Pfam: TAFII55_N
Other DBs
NCBI-GeneID: 100517257
NCBI-ProteinID: XP_003135286
Ensembl: ENSSSCG00000012493 ENSSSCG00000025484
Vega: OTTSUSG00000004723
UniProt: A0A4X1W3R0 A0A5G2QH00
Position
X:complement(82930258..82951065)
AA seq 468 aa
MECPDKQQPPSSSENDLVSSTSTSEVTSLQDFQAPVDPRAGTADDLSAPTAHDQSTQTPA
DCGAQTDGAQTDGATGTQAAAKTPLENLPEEKEMSKSQDEPPHELENQFILRLPLEHAST
VRKMVHSGRAMKDKLKIDLSSDGRHAVVEVENVPLAAKLVDLPCVIGSLKTLDKKTFYKT
ADISQMLVCTAAGGVHAPPEEPVTSTDVTAIRKNEKQRQKKYIWKHGITPPLKNVKKKRF
RKTTKKHIDFKQIEEISFTEYIESPDVEKEVKRLLCSDAEAVSARWEVIAEGETKEIESQ
GSIPSFGIASGMSGYKQGPISPEYNVLREVFSESSSNSDNDEDEDEDDEEEEDDYDDVDD
EEEEEEDYFEEDPERELQAKFIESGQYEAKEGTSSVVMEIQKRTHYVEKKLQQIRCKAQR
QKDLIKKVENLTLKSHFQSVLEQLKLQEKQKSEQLISLREQLNYFLEK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggagtgccctgacaaacaacagccccccagttcctcagaaaatgatttagtgtcatcg
acttcaacatccgaagtaacaagcctccaagatttccaagctcctgttgacccccgagct
ggaactgctgacgacctcagcgccccaacagcccacgatcaaagcacccaaactcctgcc
gattgtggcgcccaaactgatggcgcccaaacagatggcgccaccggcacccaggctgct
gccaaaacccctctggaaaacttaccagaagagaaagagatgagtaaaagccaggatgaa
cctcctcacgaacttgagaaccagtttatactgcgtctgcctctggaacatgcttctact
gtcaggaagatggtacattctggaagagccatgaaggataaactaaaaattgacttatct
tccgacggacgtcatgcagttgttgaggtggaaaatgtcccactagctgctaagctggtt
gatttgccttgtgttattggaagcctgaaaactctggataaaaaaactttttacaaaaca
gcagatatttcccagatgcttgtgtgcactgctgctggtggtgttcacgctcctcctgaa
gaaccagttacctctactgatgttacagcaatcaggaaaaatgaaaaacagagacagaaa
aaatatatctggaagcatggcattactccaccacttaagaatgtcaaaaagaaaaggttc
cgaaaaacaacaaaaaagcacattgatttcaaacaaatcgaagaaatcagctttactgag
tatattgaatctcccgatgtggaaaaggaagtgaaaagattgctgtgttcagatgctgaa
gccgtcagtgcccgatgggaggtcattgctgaaggtgaaaccaaagaaatagagagtcaa
ggctccattccaagctttgggatagcctcaggaatgagtggctataagcagggtcctatc
tcaccagaatataatgtgcttcgggaagtgttcagtgagtctagcagtaacagtgataat
gatgaggatgaggatgaggatgatgaagaggaggaggatgactatgatgatgtggatgat
gaggaggaagaagaggaagattattttgaagaggatccagaaagggagctacaggccaag
ttcattgaatctggccagtatgaagcaaaggaaggaaccagttcagtggtcatggaaatt
cagaagcggactcattacgtggagaaaaagctgcaacagattcggtgcaaagcacaaaga
caaaaggatctcatcaagaaagtggaaaacctgacgctcaagagtcattttcagtctgtg
ctggagcagcttaaattacaggaaaaacaaaaaagtgagcagcttatttctctacgggaa
caactaaactattttctggagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
   VEGA (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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