KEGG   Sus scrofa (pig): 100523071Help
Entry
100523071         CDS       T01009                                 

Gene name
USP1
Definition
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
  KO
K11832  
ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
ssc  Sus scrofa (pig)
Pathway
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Genetic Information Processing
  Replication and repair
   03460 Fanconi anemia pathway
    100523071 (USP1)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100523071 (USP1)
Peptidases [BR:ssc01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100523071 (USP1)
Ubiquitin system [BR:ssc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100523071 (USP1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     100523071 (USP1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
Position
6
AA seq 784 aa AA seqDB search
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKTSEYRGSEVDQV
VPAAQSSPINCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKK
EALKDEANQKEKGNGNCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQP
RRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVTELSKVEEKHQK
EEMSGNDSMEMDNMKHSEDYKEKLPKGNGKRKSDTEFGNMKKKVKVCKEHQSLEENQRQT
RSKRKATGDTLEIPPKINPKYISENESGRPSQKKSRVKINWLKSSAKQPSILSKFCSLGK
ITTNQGSKGQSKENEYDVEEDLGKCENDNTTNGCGLESPGNNVMPINVNEVKPINKGAEQ
IGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKT
EMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGL
EFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKV
TDLNSLELDKENFVIDQMCEVGKPEPLNEEEARGVVENYDDEEVSIRVSGSTQPSKVLNK
KNVEAIGLLGGQKSKADYELYNKASNPDKVASTALAENRNSETNTNGTHESDRNKESSDQ
IGINISGFENKISYIVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLF
YKKL
NT seq 2355 nt NT seq  +upstreamnt  +downstreamnt
atgcctggtgtcatacctagtgaaagtaatgggctttcaagaggtagtccatccaaaaaa
aacagactttccttgaagttttttcagaaaaaggaaaccaagagagccttggatttcaca
gattctcaagaaaatgaagaaaaaacttctgaatacagaggatctgaagtcgatcaagtt
gttcctgcagcacagtcctcacctataaactgtgagaagagagaaaacttgttaccattt
gtgggactgaataatctcggcaatacttgttatcttaatagtatccttcaggtattatat
ttctgtcctggttttaaatctggagtgaagcacttatttaatattatttcaaggaagaag
gaagccctgaaagatgaagccaatcaaaaagaaaagggaaatggaaattgcaaagaagat
tctttagcaagttatgaactaatatgcagcttacagtccttgatcatttcagttgaacag
cttcaggctagttttctcttaaatccagagaaatatactgatgaacttgctactcagcca
aggcgactgcttaacacactcagggaactcaaccctatgtatgaaggatatctacagcat
gatgcacaggaagtgttacagtgtattttgggaaatattcaagaaacatgccaactctta
aaaaaagaagaagtaaaaaatgtgacagagttatctaaggtagaagaaaaacatcagaaa
gaggaaatgagtggtaatgacagcatggagatggacaacatgaagcattctgaagactat
aaagaaaaactcccaaaaggaaatgggaaaagaaaaagtgacactgaatttggtaacatg
aagaaaaaagttaaagtctgtaaggaacatcagtctttggaagaaaaccagagacaaacc
agatccaaaagaaaagctacaggtgatacattagagattcctcctaaaataaaccccaaa
tacatttctgaaaatgagagtggaagaccctcacaaaagaaatcaagagttaaaataaat
tggttaaagtcttcagctaagcaacccagcattctttctaaattctgtagtctggggaaa
ataacaacaaaccaaggatccaagggacaatctaaagaaaatgagtatgatgttgaagag
gacttgggaaagtgtgaaaatgataacacaactaatggttgtggacttgaatctccaggg
aataatgttatgcccattaatgttaatgaagttaagcccataaacaaaggtgcagagcaa
attggttttgagttagtcgagaaattatttcaaggtcaactggtattaaggactcgttgc
ttagagtgtgaaagtttaacagagagaagagaagattttcaagacatcagtgtaccagtg
caagaagatgaactttccaaagtagaggaaagttctgaaatttctccagagccaaaaaca
gaaatgaagaccctgagatgggcaatttcacagtttgcttcagtggagaggattgtagga
gaagataaatatttctgtgaaaattgccatcattacactgaagctgaacgaagtcttttg
tttgacaaaatgcctgaagttataactattcatttgaagtgctttgctgctagtggcttg
gagtttgattgttatggtggtggactttccaagatcaacactcctttactgacacctctt
aaattgtcactggaagaatggagcacaaagccaaccaacgacagctatggattatttgca
gttgtaatgcatagtggcattacaattagtagcgggcattatactgcttctgttaaagtc
actgaccttaacagtttagaactagataaggaaaactttgtgatcgaccaaatgtgtgaa
gtaggtaagccagaaccactcaatgaggaggaagcgaggggtgtggttgaaaattatgat
gatgaagaagtgtccattagagtcagtggaagtacccagccaagtaaagttttgaacaaa
aaaaatgtagaagctattggacttcttggaggacaaaagagcaaagcagattatgagtta
tacaacaaagcatctaatcctgataaagttgccagtacagcacttgctgaaaacagaaat
tctgagactaatactaatgggacccatgaatctgatagaaacaaggaatccagtgaccaa
ataggcattaatattagtggatttgagaacaagatttcgtacatagtgcaaagcttaaag
gagtatgaggggaagtggttgctttttgatgattctgaagtgaaagttactgaagagaag
gacttcttgaattctctttccccttctacatctcctacatctactccttacttgctattt
tataagaagttatag

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