KEGG T01009: 100523504

Sus scrofa (pig): 100523504

Entry

100523504 CDS T01009

Definition

glutamate receptor, ionotropic kainate 4-like

Orthology

K05204

glutamate receptor, ionotropic kainate 4

Organism

ssc Sus scrofa (pig)

Pathway

ssc04080	Neuroactive ligand-receptor interaction
ssc04724	Glutamatergic synapse

Class

Environmental Information Processing; Signaling molecules and interaction; Neuroactive ligand-receptor interaction [PATH:ssc04080]
Organismal Systems; Nervous system; Glutamatergic synapse [PATH:ssc04724]

SSDB

Motif

Pfam:

Lig_chan Lig_chan-Glu_bd SBP_bac_3

Other DBs

NCBI-GI:

350588565

NCBI-GeneID:

100523504

Position

AA seq 688 aa
MEALLEQDYEGAFKGSPRFLQVSSPPQVARCFGVAFTQHLTLTQPQLLEWSWSQPISLCP
YVMQNRAGSRQSAHVCHLDPLSANLSPIHTPPAHPSASLPPISSSHPVSPPKVLSPWSPQ
IGQWHVADGLSMDSRLYASNISDSLFNTTLVVTTILENPYLMLKGNHQEMEGNDRYEGFC
VDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAERE
KVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARL
TPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAF
TLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQ
RMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKG
YGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGI
FVVLICGLIVAIFMAMLEFLWTLRHSEATEVSVCQEMVTELRSIILCQDSVHPRRRRSGL
PPPRPPIPEERRPRGTVTLSNGKLCGAGEPDQLAQRLAQEAALVARGCTHIRVCPECRRF
QGLRARPSPARSEESLEWEKTTNSSEPE

NT seq 2067 nt +upstreamnt +downstreamnt
atggaagctttgctggagcaggactatgagggggcatttaaaggaagcccccgtttcctt
caagtgtcctcccctccccaagtggccaggtgcttcggggtagcttttacccagcacctg
accctgacccaaccccagctcctggagtggtcctggagtcagcccatctccctctgccca
tatgtgatgcagaacagggcaggttcccggcaatcagcccacgtctgtcatctggatccc
ctctctgccaacctgtcccccatccacactcctccagctcatccctcggcctccttgccg
ccaatctcctcctctcacccagtttcacctccaaaggtcctctctccttggtctcctcag
attggccagtggcacgtggcagacggcctgagcatggacagccgcctctacgcctccaac
atctccgacagtctcttcaacaccaccctggtcgtcaccaccatcctggaaaacccgtat
ttaatgctgaaggggaaccaccaggagatggaaggcaatgaccgctatgagggcttctgt
gtggacatgcttaaggagctggcagagatcctccggttcaactacaagatccgcctggtc
ggggacggcgtgtacggcgtgcctgaggccaatggcacctggacgggaatggtcggggag
ctgatcgctcggaaagcagatctggccgtggcaggcctcaccatcacggctgaacgggag
aaggtgattgatttctcaaagccattcatgactctgggaattagcattctttaccgagtt
catatgggacgcagacctggctatttctccttcctggacccattttctccgggcgtctgg
ctcttcatgcttctagcctatctggccgtcagctgcgtcctcttcctggtggctcggttg
accccctatgagtggtacagcccccacccatgtgcccagggccggtgcaacctcctggtg
aatcagtactcgctgggcaacagcctctggtttccggtcgggggcttcatgcagcagggc
tccaccattgcccctcgcgccttatccacccgctgtgtcagtggcgtctggtgggcattc
acgctgatcatcatctcatcctacacggccaacctggcagccttcctgaccgtgcagcgc
atggatgtgcccattgagtcagtggacgacctggctgaccagaccgccattgaatatggc
acaattcacggaggctccagcatgaccttcttccaaaattcccgctatcagacctaccag
cgcatgtggaattacatgtactccaagcagcccagtgtgtttgtgaagagcaccgaggag
gggatcgccagggtgttgaactccaactacgccttcctgctggagtccaccatgaacgag
tactatcggcagcgaaactgcaacctcactcagattgggggcctgctggacaccaagggc
tatgggattggcatgccagtcggctctgtcttccgcgacgagtttgatctggccattctc
cagctgcaggagaacaaccgcctggaaattctgaagcgcaagtggtgggaagggggcaag
tgcccgaaggaggaggatcacagagccaaaggactgggcatggagaatattggtggaatc
tttgtggttcttatttgtggcttaatcgtggccatttttatggctatgttggagtttttg
tggaccctccggcattctgaagcgactgaggtgtccgtctgccaggagatggtgaccgag
ctgcgcagcatcatcctgtgtcaggacagtgtccacccgcgccggcggcgctccggcctg
cctccgccccggccccccatcccggaggagcgccggccccggggcaccgtgacgctcagc
aacggcaagctgtgcggggccggggagcccgaccagctggcgcagagactggcccaagag
gccgccctggtggcccgcggctgcacgcacatccgcgtgtgccctgagtgccgccgtttc
cagggcctgcgggctcggccgtcgcccgcgcgcagcgaggagagcctggagtgggagaag
accaccaacagcagcgaacccgagtag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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