KEGG   Sus scrofa (pig): 100524109Help
Entry
100524109         CDS       T01009                                 

Gene name
USP13
Definition
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X2
  KO
K11836  
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ssc  Sus scrofa (pig)
Brite
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100524109 (USP13)
Peptidases [BR:ssc01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100524109 (USP13)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100524109 (USP13)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
Position
13
AA seq 798 aa AA seqDB search
MNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDLDTDDD
LNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWENE
LPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHA
LEHYRDLGYPLAVKLETITPDGADVYSFQEEEAVLDPHLAKHLAHFGIDMLHMHGTENGL
QDNDIKPRVSEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGIS
PRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEERIQCCQ
TRKVRYMERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIPFSACL
QAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVSIDM
PDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSEIDESSVMQLAEMG
FPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGASVFGATGLD
NQPPEEIVAIITSMGFHRNQAVQALRATNSNLERALDWIFSHPEFEEDSDFVIEMENNAN
ANIISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKVCAS
ERPPKDLGYMYFYRRIPS
NT seq 2397 nt NT seq  +upstreamnt  +downstreamnt
atgaatacatttttggcctttggaagggaacacgtggaaagacattttcgaaaaactgga
cagagtgtctacatgcacctgaagagacatgtgcgtgagaaggtaagaggggcatctggt
ggagctttgcccaaaaggaggaattcgaagatttttttagatctagatactgatgacgat
ttaaatagcgacgattatgaatatgaagatgaagccaaacttgttatattcccagaccac
tatgaaatagcactaccaaatattgaggagttaccagccctggtaacaattgcctgtgat
gcagttctcagttcaaaatctccatacagaaagcaggacccagacacatgggaaaatgaa
ttgccagtatccaaatatgccaataacctcacccagttggacaatggagtcaggattcct
ccaagtggttggaagtgtgccaggtgtgacctgcgggaaaacctctggttgaatctgact
gacggctccgtgctgtgtgggaagtggttctttgacagctctggaggcaacgggcatgca
ctggagcattacagagacctgggctaccctctagctgtgaagctggaaaccatcactcct
gatggggcagatgtttattctttccaagaagaggaagctgttttggatcctcatttggcc
aagcacttagcacattttggaattgatatgcttcatatgcacgggacagagaacgggctc
caggacaatgacatcaagcctcgggtcagcgagtgggaggtgatccaggagactgggacg
aagctgaagcccatgtatggccccgggtacacaggcctcaagaacctgggcaacagctgc
tacctcagctctgtcatgcaggccatcttcagcatcccggagttccagagagcgtatgtc
ggaaatctgccaagaatatttgactactctcctttagatccaacacaagatttcaacaca
cagatgactaagttaggacatggccttctctcaggccagtattcaaaacctccagtgaaa
tctgaactcatcgaacaggtgatgaaggaggaacacaagcctcaacagaatgggatctct
ccacgaatgtttaaggcctttgtgagcaagagccacccagaattctcttccaacagacag
caggatgcccaagaatttttcttacacctggtgaatctagtagagaggaaccgcattggc
tcagaaaacccaagtgacgtttttcggtttttggtggaagaacgcattcagtgctgtcag
acccggaaagtccgctacatggagagggtggattacctgatgcagttacccgtggccatg
gaggcggcgaccaacaaggatgagttgatcgcctatgaactaacgagaagggaagcagaa
gcaaatagaagaccccttcccgagttggtgcgtgccaagataccatttagtgcctgcctt
caggccttttctgaaccagaaaacgttgatgatttctggagcagtgccctacaagcaaag
tctgcgggtgtaaaaacatctcgctttgcctcattccctgaatacttggtagtgcagata
aagaagttcacttttggtcttgactgggttcccaaaaaatttgatgtttctattgatatg
ccagacctacttgatatcaaccatctccgagccagggggttacagccaggagaagaggaa
cttccagacatcagtccccccatagttattcctgatgactcaaaagatcgcctgatgaac
caattgatagacccctcagaaatcgatgagtcatcggtgatgcagctggccgagatgggc
tttcccctggaagcgtgtcggaaggctgtgtattttactggaaacatgggagctgaggtg
gccttcaactggatcattgttcacatggaagagccagattttgctgaaccgctgaccatg
cctggttatggaggagcagcttctgctggagcctctgtttttggtgctactggattggac
aaccaacctccggaggaaattgtagctatcattacctccatgggattccatcgaaatcag
gctgttcaggcacttcgcgccacgaatagtaacctggaaagagcactggattggatcttt
agccaccctgagtttgaggaggacagcgactttgtgatcgagatggagaataatgccaat
gcgaacattatttcggaggccaagcctgaaggacccagagtcaaggatggatctggaaca
tatgaattgtttgcgttcatcagtcacatgggaacatctacaatgagtggccattatgtt
tgccacatcaaaaaggaaggaaggtgggtaatctacaatgaccataaagtttgtgcctca
gaaaggccccctaaagacctgggctacatgtacttttaccgcaggataccaagctaa

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