KEGG   Sus scrofa (pig): 100524109Help
Entry
100524109         CDS       T01009                                 

Gene name
USP13
Definition
ubiquitin specific peptidase 13 (isopeptidase T-3)
Orthology
K11836  
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ssc  Sus scrofa (pig)
Brite
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100524109 (USP13)
Peptidases [BR:ssc01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100524109 (USP13)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100524109 (USP13)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
13
AA seq 618 aa AA seqDB search
MSSCVCMETVVGMNRDDVRLPQKAICLAALRFRIENTAVVPQVRLTTPESARRGSPSTPA
PSAATARGPSPAPPPRALRLALPNQRPLGQPAPGPGCPLPPRGPLSLPAPARLPSPAQPA
AAAGRPNAPARLSSAPVRAAAMQRRGALFGMPGGSSSRKMAAGDIGELLVPHMPTIRVPR
SGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREK
VRGASGGALPKRRNSKIFLDLDTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPAL
VTIACDAVLSSKSPYRKQDPDTWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLREN
LWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDLGYPLAVKLGTITPDGADVYSFQEEEAV
LDPHLAKHLAHFGIDMLHMHGTENGLQDNDIKPRVSEWEVIQETGTKLKPMYGPGYTGLK
NLGNSCYLSSVMQAIFSIPEFQRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQY
SKPPVKSELIEQVMKEEHKVMVKKPGPRCGFRSHLFWAFIQAVTSWATLGAESTLPGGEG
DWMGIQEPGSLSRLRREL
NT seq 1857 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcctgtgtgtgcatggaaacggtggtgggcatgaacagagatgatgtcagattg
cctcaaaaggcaatctgcctagctgctttgcgatttagaatagaaaacactgcggttgtg
cctcaagtccgactcacgactcccgagtctgcccgccggggctcgccctccacccccgct
cctagcgcggccactgctcgaggcccctctccagcgccccctccccgcgcgctgcggctg
gcgctcccgaaccagcgtccccttggccagcccgccccaggccccgggtgcccgctcccg
ccccgcggcccgctctccctgcccgccccggctcggctcccgtcgcccgcgcagcccgcc
gcagccgcgggcagacccaacgctccagctcggctcagctccgctccggtgcgcgccgcg
gccatgcagcgccggggcgccctattcggcatgccgggcggcagcagcagcaggaagatg
gctgcaggagacatcggcgagctgctggtgccccacatgccgacgatccgcgtgcccagg
tccggggaccgagtctacaagaacgagtgcgcattctcctacgactctcccaattctgaa
ggtgggctctatgtatgcatgaatacatttttggcctttggaagggaacacgtggaaaga
cattttcgaaaaactggacagagtgtctacatgcacctgaagagacatgtgcgtgagaag
gtaagaggggcatctggtggagctttgcccaaaaggaggaattcgaagatttttttagat
ctagatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaactt
gttatattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctg
gtaacaattgcctgtgatgcagttctcagttcaaaatctccatacagaaagcaggaccca
gacacatgggaaaatgaattgccagtatccaaatatgccaataacctcacccagttggac
aatggagtcaggattcctccaagtggttggaagtgtgccaggtgtgacctgcgggaaaac
ctctggttgaatctgactgacggctccgtgctgtgtgggaagtggttctttgacagctct
ggaggcaacgggcatgcactggagcattacagagacctgggctaccctctagctgtgaag
ctgggaaccatcactcctgacggggcagatgtttattctttccaagaagaggaagctgtt
ttggatcctcatttggccaagcacttagcacattttggaattgatatgcttcatatgcac
gggacagagaacgggctccaggacaatgacatcaagcctcgggtcagcgagtgggaggtg
atccaggagactgggacgaagctgaagcccatgtatggccccgggtacacaggcctcaag
aacctgggcaacagctgctacctcagctctgtcatgcaggccatcttcagcatcccagag
ttccagagagcgtatgtcggaaatctgccaagaatatttgactactctcctttagatcca
acacaagatttcaacacacagatgactaagttaggacatggccttctctcaggccagtat
tcaaaacctccagtgaaatctgaactcatcgaacaggtgatgaaggaggaacacaaggtg
atggtgaaaaaacctggtccaagatgtggttttcgatcacatttattctgggctttcatc
caggctgttacttcttgggccactcttggggcagagtccacccttcctggtggagaagga
gactggatggggattcaggagcctggctccctctccaggctccgcagggagctatag

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