KEGG   Sus scrofa (pig): 100621155
Entry
100621155         CDS       T01009                                 
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B isoform X1
  KO
K14849  ribosomal RNA-processing protein 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssc01009]
    100621155 (RRP1B)
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssc03009]
    100621155 (RRP1B)
Protein phosphatases and associated proteins [BR:ssc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100621155 (RRP1B)
Ribosome biogenesis [BR:ssc03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    100621155 (RRP1B)
SSDB
Motif
Pfam: Nop52
Other DBs
NCBI-GeneID: 100621155
NCBI-ProteinID: XP_020926718
Ensembl: ENSSSCG00000021698
Position
13:206629176..206653374
AA seq 769 aa
MAPAMQPAEIQFAQRLASHEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFY
CMWVQDEPLLQEELASAISQLVHVVNNSEAQHLFLQTFWQTVTREWTGIDRRRLDKLCML
TRLVLRQSFEVLKRSGWEESQIQLFLDVLMKEVLHPESQAPSGVKFHFVAIYLEELSRVG
GKELLADQNLKFIDPFCKVAARAKDHALVQTIARGVFEVIVDQSPLVPEGTLGVQKAREG
DSDLSEEETSESDMAWRRAAGKKPPAPGGPQSRKEGVGDGGRDDAGSSEDAGPLLQFDYR
AVAERLREVATSKDVPPFNRKRLSRLIRKFRDLSEGEENQKTVTAGRIPRLSFAEDAPAA
PDDRALSRGRRKRKASKLRGDAEVGREQGTKSFPAEEEEAEGGLRKRKRKRKKRNHLRPA
HLGPGGEAVCPEQNGSREPEAGPGKAQQTSAAELGAGAAPSLSRRKRLRKRSLRAQVQSP
ESAASPPEDAAPGGPASGPTQGVALAGGAPVLKKQRKLGALLVNGSGPPTRAWPPQEGPP
ARPADGGGCPAAVPQSGELGRKKGEPGGLDLRPPCARKAAVLKKRKKVSQMSPLAAHRGL
KLVQALGGAGILRPLRKELRTEKDFVKFEAAFSPKPLFFRKAKSSTTAPPGTPPQPNRTP
SSAKKVTFGLSRNMTAGPVTAPGAGGCRTEAPAVEWGLRLPPGRVQEDRQEPLGQSHGPL
PRGLQPRAEAAARGAEDAHQLAGRRAPGDQAAADSHAKEKAHGDGLLLG
NT seq 2310 nt   +upstreamnt  +downstreamnt
atggcccccgccatgcagccggccgagatccagttcgctcaacggctggcgtcccacgag
aagggcatccgagaccgggcggtgaagaagctgcgccagtacatcagcgtgaagacacag
agggagacaggaggtttcagtcaagaagaacttctcaaaatatggaaagggctcttctac
tgcatgtgggtgcaggatgaaccccttctgcaggaggagctcgcgagcgccatttcccag
ctcgtccatgttgttaacaactcagaggctcagcacctgttcctgcagaccttctggcag
acagtgacccgggagtggacgggcatcgaccggcggcgcctggacaagctctgcatgctg
acccgtctggtcctgaggcagtcctttgaggttctgaagcgaagcggctgggaagaaagc
caaatccagcttttcctagacgtcctgatgaaggaggtcctgcacccggagagccaggct
ccgagcggcgtgaagttccacttcgtcgctatctacctggaggagctgtccagggtgggg
gggaaggagctcttggcagatcagaacctcaagtttattgatccattctgcaaggtcgca
gccagggccaaggaccacgctctggtgcagaccatagccaggggcgtttttgaagtcatt
gtagatcagtctcctctcgtgcctgaagggacgctcggggtacagaaagccagagagggt
gacagcgacctctctgaggaggagacctcggagagtgacatggcctggaggagagccgcc
ggcaaaaagccgccagcgccgggcggacctcagtccagaaaggagggcgtcggggacggc
ggacgggacgacgccgggagctcggaggacgccgggccgcttctccagtttgactaccgg
gcggtggccgagcggctccgggaagtcgccaccagcaaggacgtccctcccttcaacagg
aagcgcctctccaggctgatcaggaaattccgggacctctcggaaggtgaggaaaatcag
aagactgtaactgcaggcaggatccctcgcctcagttttgcggaggacgctcctgctgcc
ccagacgaccgagccctcagccgggggaggcgcaagagaaaggcctcgaagctccggggg
gacgcggaggtgggacgggagcaaggaaccaagtccttccctgccgaggaggaggaggcc
gaaggcgggctgcgcaagaggaagaggaagaggaagaagaggaaccacctccggcctgca
catctagggcctggcggcgaagctgtgtgcccagagcagaatgggagccgcgagccagaa
gctggtccaggaaaggcccagcagacgagtgcggctgagctgggggcaggggcggcgccc
tcgctcagcaggaggaagcgcctgaggaagaggagcctgagggcccaggtgcagagccca
gagtcagcagcgtcccctccagaggatgcggctccaggtggccccgccagcggtcccact
cagggagtggccctggccggcggcgccccagtcctgaagaagcagcggaaactcggggcc
cttctggtcaatggcagtggcccgcccacgcgggcctggcccccgcaggagggccctcca
gccaggccagcagatggagggggctgccccgccgccgtgccccagagtggggaactgggg
agaaagaagggggagcccggcggccttgacctccgccccccgtgcgctcggaaagctgcc
gtactgaaaaagaggaagaaagtgagccagatgtcccccttggcggcgcacagagggctc
aagctcgtccaggctctgggcggcgccgggatcctccgccctctgaggaaggagctgagg
acggagaaggactttgtgaagttcgaagccgccttctccccgaagcccctgttcttcagg
aaggccaagagcagcaccactgccccgccgggcacccccccgcagccaaacagaacaccg
tccagcgccaagaaggtgaccttcgggttgagcaggaacatgacggcaggccccgtgacg
gcaccgggggcgggcgggtgcaggacggaagcgccagccgttgagtggggccttcgcctt
cctccgggcagagttcaggaagaccgacaagagcctcttggtcagtcccacgggcccctc
ccgcgtggccttcaaccccgcgcagaggccgctgcacggggtgctgaagacgcccaccag
ctcgccggccggcgcgcccctggggaccaggcagccgctgacagccacgccaaagagaag
gcccacggcgatggacttcttctagggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (69)   

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