KEGG   Sus scrofa (pig): 100624050Help
Entry
100624050         CDS       T01009                                 

Gene name
HDAC4
Definition
histone deacetylase 4
Orthology
K11406  
histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ssc  Sus scrofa (pig)
Pathway
Alcoholism
Epstein-Barr virus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    100624050 (HDAC4)
  Substance dependence
   05034 Alcoholism
    100624050 (HDAC4)
  Infectious diseases
   05169 Epstein-Barr virus infection
    100624050 (HDAC4)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100624050 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
15
AA seq 1121 aa AA seqDB search
MEPSEPSKFCLLSLVGPLPLWTVASALDVASALPLQVAPPAVPMDLRLDHQFPLPVTEPG
LREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQELLAMKHQQ
ELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKA
LAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFPLRKTA
SEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAPSSPNN
SSGSVSTENGIAPAVPSVPAETSLAHRLVTREGSVGPLPLYTSPSLPNITLGLPATGPST
AAGQQEAERLTLPALQQRIHLFPGTHLSPYLSAAPLDRDAGTAHNPLLQHMVLLEQPAAQ
TPLVTGLGALPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLVIQQQH
QQFLEKHKQQFQQQQLHLNKILPKPSEPARQPESHPEETEEELREHQALLEEPFLDRLSG
QKEVHALGVQVKQEPVESDDEEAEPPREAEPGQRQPREQELLFRQVLAYLILRTEETVFD
QMPGPLGDKKAPVTAPQMRKSSMPRSPGSASALLEQQRIHQLRNYQASMEAAGVPVSFGG
HRPLSRAQSSPASATFPMSVQEPPAKPRFTTGLVYDTLMLKHQCACGNTNSHPEHAGRIQ
SIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTNPLNRQKLDSKKLLGSLT
SVFVRLPCGGVGVDSDTIWSEVHSSGAARLAVGCVVELAFKVATGELKNGFAVVRPPGHH
AEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLH
RYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFA
PDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICD
ASEACVSALLGNELDPLPEKVLQQRPYDNSVRSMEKVIDIHSQYWRSLQRLASTVGYSLV
EAQKCENEEAETVTAMASLSVGVKAPEKRPEEEPMEEEPPL
NT seq 3366 nt NT seq  +upstreamnt  +downstreamnt
atggaaccctcagaaccctccaagttctgccttttgagcctggtggggccgcttcctctg
tggacagtggcctcagcgctggatgtggcctcggcgctgcctctgcaagtggctcccccg
gcggtgcccatggacctgcgcctggaccaccagttcccgctgcccgtgacggagcccggc
ctccgggagcagcagctgcagcaggagctcctggccctgaagcagaagcagcagctgcag
aggcagatcctcattgccgagttccagaggcagcacgagcagctgtcccggcagcatgaa
gcccagctccacgagcacatcaaacaacagcaagagctgctggccatgaagcaccagcag
gagctgttggagcatcagcggaagctggagaggcaccgccaggagcaggagctggagaag
cagcaccgggagcagaagctgcagcagctcaagaacaaggagaaaggcaaagagagtgcc
gtggccagcacggaagtgaagatgaagctacaagagtttgtcctcaacaaaaagaaggcg
ctggcccaccggaacctgaaccactgcatgtccagcgacccccgctactggtacgggaag
acacagcacagctccctggaccagagctccccgccccagagcggggtgtccgcctcctac
aaccacccggtcctgggcatgtatgacgccaaagatgactttccgctcagaaagacagct
tctgaacccaatctgaaattacgctccaggctaaagcagaaagtggccgagagacggagc
agccctctgttacgcaggaaagatgggcctgtggttactgctctaaaaaagcgtcccctg
gatgtcacagactccgcgtgcagcagcgccccgggctccgcgcccagctcgcccaacaac
agctccgggagcgtcagcacggagaacggcatcgcgcccgctgtgcccagcgtcccggcc
gagaccagcttggctcacaggctcgtgactcgggaaggctccgtgggccccctccccctc
tacacgtccccgtctttgcccaacatcacgctggggcttcccgccaccggcccttccacg
gcggcgggccagcaggaagccgagaggctcaccctccccgccctccagcagcgcatccac
ctcttccccggcacccacctctccccctacctgagcgcggctcccctggaccgggacgcg
gggacggcccacaaccctctcctgcagcacatggtcctcctggagcagccggccgcgcag
acacccctggtcacaggcctgggagcgctgcccctgcacgcgcagtccctggtgggggcg
gaccgcgtgtccccgtccatccacaagctgcggcagcaccgcccgctggggcgcacgcag
tcggcgccactgccccagaacgcgcaggccctgcagcacctggtgatccagcagcagcac
cagcagttcctggagaagcacaagcagcagtttcagcagcagcagctgcacctcaacaag
attctccccaagcccagcgagccggcccggcagcccgagagccaccctgaggagacagag
gaggagctgcgggagcaccaggccctcctggaggagcccttcctggaccggctctcaggg
cagaaggaggtgcacgcactgggggtgcaggtgaagcaggagcccgtcgagagtgacgac
gaggaggccgagcccccgcgggaggcggaaccaggccagcggcagcccagggagcaggag
ctgctcttcagacaggtcctcgcctaccttatcctgcggacagaagagacagtgtttgat
cagatgccaggacctttaggggacaagaaggcgccagtgacagccccacagatgcggaag
agcagcatgcccaggtccccggggtcggcaagcgccctcctggagcagcagcgcattcac
cagctgaggaactaccaggcgtccatggaggccgccggcgtccccgtgtccttcggcggc
caccggcctctgtcccgggcacagtcctcccccgcgtccgccaccttccccatgtctgtg
caggagccccccgccaaaccaaggttcaccacaggtctcgtgtacgacacgctgatgctg
aagcaccagtgcgcctgcgggaacaccaacagccacccggagcatgctgggaggatccag
agcatctggtccaggctgcaggagactggccttcgaggcaaatgtgagtgcatccgcgga
cgcaaggccaccctggaggagctgcagacagtgcattcggaggcccacgccctgctctac
ggcacaaaccccctcaacaggcagaaactggacagtaagaaacttctaggctcgctcacg
tcggtgtttgtcaggctgccctgcggtggtgtcggcgtagacagcgacaccatatggagc
gaggtgcactcgtcgggggccgcccggctggccgtgggctgcgtggtggagctggccttc
aaggtggccacaggggagctgaagaacggctttgctgtggtccgccctccgggacaccac
gcggaggagagcacgcccatggggttctgctacttcaactccgtggccatcgccgccaag
cttctccagcaaaggctgcacgtgagcaagaccctcgtagtggactgggacgtgcaccac
gggaacgggacccagcaggccttctacagcgaccccagcgtgctctatgtctcgctgcac
cgctacgacgacggcaacttcttcccgggcagcggggctcctgacgaggtgggcacaggg
ccaggcgtgggcttcaacgtcaacatggctttcacgggcggcctggacccccccatggga
gacgccgagtacttggcggccttcagaactgtggtcatgccgatcgccaacgagtttgcc
ccagacgtggtgctggtgtcatcaggcttcgacgccgtggagggccaccccacgcctctc
ggcggctacaacctctctgccaaatgttttgggtacctgacgaagcagctgatgggcttg
gccggcggccgggtggtcctggccctggaggggggtcacgacctcacagccatctgtgac
gcctcggaggcctgcgtctctgctttgctgggaaacgagcttgaccctctcccagaaaag
gttttgcagcagagaccctacgacaactccgtgcggtccatggagaaggtcattgacatc
cacagccagtactggcgctccctgcagcgtctcgcctccaccgtgggctactccctggtc
gaggcccagaagtgcgagaacgaggaagccgagacggtcactgccatggcctcgctgtct
gtgggcgtcaaggcacccgagaagagacccgaggaggagcccatggaagaggagccgccc
ctgtag

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