KEGG   Sus scrofa (pig): 100624050Help
Entry
100624050         CDS       T01009                                 

Gene name
HDAC4
Definition
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  
histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ssc  Sus scrofa (pig)
Pathway
Apelin signaling pathway
Alcoholism
Human papillomavirus infection
Epstein-Barr virus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Environmental Information Processing
  Signal transduction
   04371 Apelin signaling pathway
    100624050 (HDAC4)
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    100624050 (HDAC4)
  Substance dependence
   05034 Alcoholism
    100624050 (HDAC4)
  Infectious diseases
   05169 Epstein-Barr virus infection
    100624050 (HDAC4)
   05165 Human papillomavirus infection
    100624050 (HDAC4)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100624050 (HDAC4)
Chromosome [BR:ssc03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100624050 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
Position
15
AA seq 1087 aa AA seqDB search
MSSQSHPDGLSGRDQPVELLSPARVNHMPSTVDVASALPLQVAPPAVPMDLRLDHQFPLP
VTEPGLREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGSVSTENGIAPAVPSVPAETSLAHRLVTREGSVGPLPLYTSPSLPNITLGLPA
TGPSTAAGQQEAERLTLPALQQRIHLFPGTHLSPYLSAAPLDRDAGTAHNPLLQHMVLLE
QPAAQTPLVTDWYLAGLGALPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQA
LQHLVIQQQHQQFLEKHKQQFQQQQLHLNKILPKPSEPARQPESHPEETEEELREHQALL
EEPFLDRLSGQKEVHALGVQVKQEPVESDDEEAEPPREAEPGQRQPREQELLFRQQAALL
EQQRIHQLRNYQASMEAAGVPVSFGGHRPLSRAQSSPASATFPMSVQEPPAKPRFTTGLV
YDTLMLKHQCACGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSE
AHALLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWSEVHSSGAARLAVGC
VVELAFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVV
DWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGG
LDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT
KQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSM
EKVIEIHSQYWRSLQRLASTVGYSLVEAQKCENEEAETVTAMASLSVGVKAPEKRPEEEP
MEEEPPL
NT seq 3264 nt NT seq  +upstreamnt  +downstreamnt
atgagctcccagagccacccagatggactttctggccgagaccagccagtggagctgctg
agccctgcccgcgtgaaccacatgcccagcactgtggatgtggcctcggcgctgcctctg
caagtggctcccccggcggtgcccatggacctgcgcctggaccaccagttcccgctgccc
gtgacggagcccggcctccgggagcagcagctgcagcaggagctcctggccctgaagcag
aagcagcagctgcagaggcagatcctcattgccgagttccagaggcagcacgagcagctg
tcccggcagcatgaagcccagctccacgagcacatcaaacaacagcaagagctgctggcc
atgaagcaccagcaggagctgttggagcatcagcggaagctggagaggcaccgccaggag
caggagctggagaagcagcaccgggagcagaagctgcagcagctcaagaacaaggagaaa
ggcaaagagagtgccgtggccagcacggaagtgaagatgaagctacaagagtttgtcctc
aacaaaaagaaggcgctggcccaccggaacctgaaccactgcatgtccagcgacccccgc
tactggtacgggaagacacagcacagctccctggaccagagctccccgccccagagcggg
gtgtccgcctcctacaaccacccggtcctgggcatgtatgacgccaaagatgactttccg
ctcagaaagacagcttctgaacccaatctgaaattacgctccaggctaaagcagaaagtg
gccgagagacggagcagccctctgttacgcaggaaagatgggcctgtggttactgctcta
aaaaagcgtcccctggatgtcacagactccgcgtgcagcagcgccccgggctccgcgccc
agctcgcccaacaacagctccgggagcgtcagcacggagaacggcatcgcgcccgctgtg
cccagcgtcccggccgagaccagcttggctcacaggctcgtgactcgggaaggctccgtg
ggccccctccccctctacacgtccccgtctttgcccaacatcacgctggggcttcccgcc
accggcccttccacggcggcgggccagcaggaagccgagaggctcaccctccccgccctc
cagcagcgcatccacctcttccccggcacccacctctccccctacctgagcgcggctccc
ctggaccgggacgcggggacggcccacaaccctctcctgcagcacatggtcctcctggag
cagccggccgcgcagacacccctggtcacagactggtatcttgcaggcctgggagcgctg
cccctgcacgcgcagtccctggtgggggcggaccgcgtgtccccgtccatccacaagctg
cggcagcaccgcccgctggggcgcacgcagtcggcgccactgccccagaacgcgcaggcc
ctgcagcacctggtgatccagcagcagcaccagcagttcctggagaagcacaagcagcag
tttcagcagcagcagctgcacctcaacaagattctccccaagcccagcgagccggcccgg
cagcccgagagccaccctgaggagacagaggaggagctgcgggagcaccaggccctcctg
gaggagcccttcctggaccggctctcagggcagaaggaggtgcacgcactgggggtgcag
gtgaagcaggagcccgtcgagagtgacgacgaggaggccgagcccccgcgggaggcggaa
ccaggccagcggcagcccagggagcaggagctgctcttcagacagcaagccgccctcctg
gagcagcagcgcattcaccagctgaggaactaccaggcgtccatggaggccgccggcgtc
cccgtgtccttcggcggccaccggcctctgtcccgggcacagtcctcccccgcgtccgcc
accttccccatgtctgtgcaggagccccccgccaaaccaaggttcaccacaggtctcgtg
tacgacacgctgatgctgaagcaccagtgcgcctgcgggaacaccaacagccacccggag
catgctgggaggatccagagcatctggtccaggctgcaggagactggccttcgaggcaaa
tgtgagtgcatccgcggacgcaaggccaccctggaggagctgcagacagtgcattcggag
gcccacgccctgctctacggcacaaaccccctcaacaggcagaaactggacagtaagaaa
cttctaggctcgctcacgtcggtgtttgtcaggctgccctgcggtggtgtcggcgtagac
agcgacaccatatggagcgaggtgcactcgtcgggggccgcccggctggccgtgggctgc
gtggtggagctggccttcaaggtggccacaggggagctgaagaacggctttgctgtggtc
cgccctccgggacaccacgcggaggagagcacgcccatggggttctgctacttcaactcc
gtggccatcgccgccaagcttctccagcaaaggctgcacgtgagcaagaccctcgtagtg
gactgggacgtgcaccacgggaacgggacccagcaggccttctacagcgaccccagcgtg
ctctatgtctcgctgcaccgctacgacgacggcaacttcttcccgggcagcggggctcct
gacgaggtgggcacagggccaggcgtgggcttcaacgtcaacatggctttcacgggcggc
ctggacccccccatgggagacgccgagtacttggcggccttcagaactgtggtcatgccg
atcgccaacgagtttgccccagacgtggtgctggtgtcatcaggcttcgacgccgtggag
ggccaccccacgcctctcggcggctacaacctctctgccaaatgttttgggtacctgacg
aagcagctgatgggcttggccggcggccgggtggtcctggccctggaggggggtcacgac
ctcacagccatctgtgacgcctcggaggcctgcgtctctgctttgctgggaaacgagctt
gaccctctcccagaaaaggttttgcagcagagacccaacgccaacgccgtgcggtccatg
gagaaggtcattgaaatccacagccagtactggcgctccctgcagcgtctcgcctccacc
gtgggctactccctggtcgaggcccagaagtgcgagaacgaggaagccgagacggtcact
gccatggcctcgctgtctgtgggcgtcaaggcacccgagaagagacccgaggaggagccc
atggaagaggagccgcccctgtag

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