KEGG   Sus scrofa (pig): 100738726
Entry
100738726         CDS       T01009                                 
Symbol
PARP4
Name
(RefSeq) poly [ADP-ribose] polymerase 4
  KO
K10798  poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03410  Base excision repair
ssc04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100738726 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100738726 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssc03032]
    100738726 (PARP4)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100738726 (PARP4)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100738726 (PARP4)
Enzymes [BR:ssc01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     100738726 (PARP4)
DNA replication proteins [BR:ssc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100738726 (PARP4)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100738726 (PARP4)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100738726 (PARP4)
SSDB
Motif
Pfam: VIT PARP VIT_2 BRCT VWA_3 VWA BRCT_2 VWA_2 PTCB-BRCT PARP_reg
Other DBs
NCBI-GeneID: 100738726
NCBI-ProteinID: XP_020921664
Ensembl: ENSSSCG00000022957
Position
11:359503..432224
AA seq 1451 aa
MTVGIFEDCTFCLKVKHLPRQQKRKLQTDIKENGGNFSFLLNAQCTHVILDNADVLSQYQ
LNSLQKHHIHITNPEFIWESIKEGKLVDVRNYDPLKSVGIAPPPCQKASSSEVKTDDPSL
DSHPEKDDVALTEFSTENAEIPHFPQDFEVAKYNTLEKVGPQGGSETAVVELWCTGPPGE
RIFLTSARFLLADGTQTKRLFSVQKSSEDASQRYERYVEELQEQGFLLREHFTPEATQLA
SEKLQALLLEEAVPSSALSQEVSGLVEMIWAEALGRLEHTLLKPVNRMSLNDVGKAEGVL
LLVKMAVKKGETAGYLHKMMSEFYRLIPHRGVPAEPVTLRLVAQKEDLCQLIRDMVSVCE
TNLSKPNPPSLAKYRALRCKIELVEPNTEEFSRVKEEVLRNDHRKSPVNILQIFRVGRAS
EAAEFLSQLGTVRRLLHGSPAQSFVGILSRGLLLPKVVEDRGVKRTDAGNLGSGIYFSDS
LSTSIKYSSPGATDGTRLLVVCDVALGKCVDLHEKDLSLTEAPPGYDSVHGVRGTASVTS
DFEDDEFVVYKTNQVKMKYVIKFCIPGDEIKDFHPGDNTELEEHTPEISHFSKVEDLQLP
DTDPLGHVKAGLQDPSGNSVPLEDVHIKGKIIDFVAQVIVFQTYTNQSPVPIEAKYVFPL
DDKAAVCGFEAFINGKHIVGEVKEKEAAHREYGAAVSQGHGAYLMDQDAPDIFTVSVGNL
PPKAKVLIKITYITELSLQGACAAFFLPATVAPWQQDRAVNENTQDTVKKICIKEIGTQQ
SFSLTLSIEMPHLIEFISSDTHQLRQKRTDCKAVISTVEGSSLDSSGFSLRIGLLDACLS
RMWVEKHPEKESEACMLVFQPDLGSIPPEQAERSEVVICLDCSNSMEGETFLEAQQVALH
ALSLVGEPWKVNIVRFGTGYKELFSYPKCVTSSSTASECIRTAAPTMGNTELWKVLWHLS
LLPPAHGLRNILLISDGHLQHESLTLQLVKRNAQHTRLFSCGVGSTANRHILRTLSQYGA
GAFEYFNSKSKHGWKKQIEDQMARLRSPSCHAVSIKWQQLSTGAPAPLQAPAQVQALFHN
DRLLVYGFIPYCTQATLCAIIQDKKYSTVVSTTELQKTTGTMIHKLAARALIRDYEDGAL
HEDETHHEMKKQTLKSLIIKLSKENSLLTQFTSFVAVEKRDGNELPSPHIPNISELIAKE
DVDFLPYMSWQKEQPDTSTVQLLSAFSESNDEFKPKRLSKKKLKLQKSAGFAAGTFQGRT
ALSASRVAELPLDFSRMEALEPTGVEPLFPPLGVASASAAPLGPRFLRAPALDSAPGGAP
SFLFGSPPRPLELDGAPHVYLGLAASTPPPRIHLEGVGAAFRAGAAFGSTCSARAPPAPP
LLPGASPLPRPTPLALWGARDLSLLARRDCSPPVPAAAPRSPSYSLPPPLPGSPAVPPPP
PLPGSPAGPPP
NT seq 4353 nt   +upstreamnt  +downstreamnt
atgaccgtgggcatctttgaagattgtaccttctgcttgaaagtcaaacacttacctcgt
caacagaagaggaagttacaaactgacattaaggagaatggtggaaatttctccttttta
ttaaacgctcagtgcacacatgtgatcttagacaacgctgatgttctgagccagtatcaa
ctgaactctctccagaagcaccatatccatatcaccaacccagagtttatatgggaatct
atcaaggaagggaaactggtggacgtaagaaattatgaccccttaaagtcagtgggcatc
gcgccacctccttgtcaaaaggcaagcagctccgaagtgaaaaccgatgatccatccctg
gacagtcacccggagaaggacgacgtggccctcaccgagttttctacggagaatgctgaa
attcctcattttcctcaagatttcgaagtagcaaaatataacaccttggaaaaagtgggg
ccgcagggaggctcggagacggcggtggtggagctgtggtgcacggggccgcccggggag
cgcatcttcctgacatctgctcgcttcctcctcgccgacggcacacagacgaagcggctg
ttctctgttcagaaaagctctgaagacgcgagtcagcgctatgagcgatacgtggaagag
ctgcaggaacaagggtttctgctccgagaacattttacacccgaggcaacccagttagca
tccgaaaaactgcaagcattgctcttggaggaggcagtaccttcgagtgcgctgagccag
gaagtgagcggtttggtggagatgatttgggcagaagctctgggccgcctggagcacacg
ctgctcaaacctgtgaacaggatgagcctcaacgacgtgggcaaggcggagggggttctc
cttcttgtcaagatggccgtgaaaaagggcgagacagcggggtatctgcacaagatgatg
agcgagttctacaggttaattcctcacagaggcgtcccagccgagcccgtcaccctgcgg
ctggtggctcagaaagaggacctgtgccagctaataagagacatggttagtgtctgtgaa
actaatttgtccaaacccaacccaccgtctcttgccaaataccgagctttgagatgcaaa
attgagctggttgagcccaacactgaagaattttccagagtcaaggaagaggtgctgcgg
aatgatcacagaaagagtcccgtgaacatcctgcagatatttcgcgttggcagagcgagt
gaagcggcagagtttctgagccagctgggcaccgtgaggcgcttgctgcacgggtctcct
gcccagagcttcgtggggatcctgtcccgcgggttgcttctgcccaaagtagttgaagat
cgtggcgtgaaaaggacagatgctggaaatctcgggagtggaatatatttcagcgattcc
ctcagcacaagtatcaagtactcgagcccaggagccacggacggcacccggctgctggtg
gtctgtgatgtggcgctgggcaagtgcgtggacttgcatgagaaagacttgtccttgacg
gaagccccgccgggttacgacagcgtccacggggttcgagggacagccagcgtcacctcg
gactttgaggatgatgagtttgtcgtatataaaaccaatcaggttaaaatgaaatatgtt
attaaattttgtatacctggagatgaaataaaggactttcatcctggtgataatacggaa
ttagaggaacacacacctgagatttcacatttttcaaaggttgaagatctccagttaccg
gacaccgacccgctcggccatgtcaaggctggcctccaggacccgtctgggaattcagtt
cccctggaggatgttcatatcaaggggaaaatcatagactttgtagcccaggtcattgtt
tttcaaacatacacaaaccaaagtcctgtgcccattgaggcaaaatacgtttttcccctg
gacgacaaggcggcggtgtgcggtttcgaagcgttcatcaacgggaagcacattgtggga
gaggtgaaggagaaggaagcagcccaccgagagtacggagcggcagtcagtcaaggtcac
ggcgcatacctgatggaccaggatgcaccggacattttcaccgtcagtgttggcaactta
ccccctaaggctaaggtcctgatcaaaatcacctacatcacggagctcagcctgcaaggt
gcctgcgctgccttcttcctgccggccaccgtggccccctggcagcaggacagagctgtg
aatgaaaacactcaggatacggtcaagaagatttgtataaaggaaataggaacacagcaa
agcttttctctgactctctctattgagatgccacacctgattgaattcatctccagtgac
acccaccaactgagacaaaagagaacggattgcaaagctgtaattagcacggtcgaaggt
agctccctggacagcagtggattttctctccgcatcggtttgctcgatgcgtgtctttca
aggatgtgggttgaaaaacatccagaaaaagaaagtgaggcctgcatgctggtctttcag
ccagaccttggcagcatcccccccgagcaagccgagcggagcgaagtggtcatttgtctc
gactgctccaattccatggagggcgagactttcctggaagcccagcaggtcgccctgcac
gcgctgtccttggtgggggagccgtggaaggtgaacatcgtcaggtttggcacaggttac
aaggagctgttttcataccccaagtgcgtcacgagcagcagcacagcgtccgagtgcatc
aggaccgctgcgcccaccatgggaaacacagagctctggaaggtgctctggcatctaagt
ttgctcccgcctgctcacgggctgcgaaacatcctcctgatctcagacgggcacctgcag
cacgagagcctgaccctgcagctcgtgaagaggaacgcccagcacacccggctgttctcc
tgcggcgtcggttccacagcaaaccgtcatatcttaaggactttgtcccagtatggtgct
ggagcatttgaatattttaactcaaagtccaaacacggttggaaaaaacagatagaagac
cagatggcgagattgcgttctccgagttgccacgcagtctccatcaagtggcagcagctg
agcacaggcgcacctgcgcccctgcaggccccagcccaggtgcaggccttattccacaat
gaccgactcctcgtctatggatttattccttactgcacacaggcaactctgtgtgcaata
attcaagacaaaaagtattctaccgtggtatcaactactgaacttcagaagacaacggga
acaatgattcacaagctggcagctcgagctctgatcagagactacgaggacggcgctctc
cacgaagacgagacgcatcacgagatgaagaagcaaaccttaaaatctctgattattaaa
ctcagtaaagaaaactccctcctcacacaatttacaagctttgtagcagttgagaaaagg
gatggtaacgagttaccctctcctcacattccaaatatttcggaacttattgccaaagaa
gacgtagattttctgccgtacatgagctggcagaaggagcaaccagataccagcacggta
cagcttctttcagcgttctctgaaagcaacgacgaattcaaaccgaaacgtctgtctaag
aaaaaacttaagctgcagaaatctgcgggcttcgcagcgggtaccttccaaggcagaacg
gcgctctcggcgagccgcgtggcggagctgccgctggatttcagtcggatggaggcgctc
gaaccaacgggagtggagccgctgtttccaccactgggtgtggccagcgcttctgccgcc
cctctcgggccgcgtttcctccgcgccccggctctggattcggccccgggcggggcgccc
agctttctcttcggctcccccccgcgtccccttgagctggacggggcgccccacgtctac
ctgggcctcgccgcctccacgccgccgcccaggatccaccttgagggagttggggctgcc
ttccgggccggcgccgcctttggctccacctgcagcgcccgcgccccgcccgcgcccccg
ctcctcccgggcgcctctcctcttccccgtccaacacccctagctctctggggtgcccgt
gacctctccctcctcgctcggcgagattgctctcctccagttcccgcagcagctcctcgg
agccccagctactcccttccccctccccttcccgggtccccggctgttcctcctccccct
ccccttcccggttccccggctggtcctcctccc

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (10)   
   Pfam (10)   
All databases (65)   

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