KEGG   Sus scrofa (pig): 102164968
Entry
102164968         CDS       T01009                                 
Symbol
KRT6A
Name
(RefSeq) keratin, type II cytoskeletal 6C isoform X1
  KO
K07605  type II keratin, basic
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    102164968 (KRT6A)
   04147 Exosome [BR:ssc04147]
    102164968 (KRT6A)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     102164968 (KRT6A)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   102164968 (KRT6A)
  Exosomal proteins of other body fluids (saliva and urine)
   102164968 (KRT6A)
  Exosomal proteins of colorectal cancer cells
   102164968 (KRT6A)
  Exosomal proteins of bladder cancer cells
   102164968 (KRT6A)
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 CENP-F_leu_zip ATG16 COG6_N Alanine_zipper DUF745 UPF0184 APG6_N DUF1192 Metal_resist ADIP Fib_alpha Golgin_A5 TMF_TATA_bd LPP ApoLp-III
Other DBs
NCBI-GeneID: 102164968
NCBI-ProteinID: XP_013840212
Position
5:complement(17830147..17851113)
AA seq 565 aa
MSCKSIVRSQSSGRRGFSASSARVPGVCRSGFSTVSVSRSRGSGGLSGVCGGAGFGSRSL
YSLGGSKRISIGGGSCVIGGGYGGGVGAGFGFGGGARSGFGFGAGSGGFGLGGGAGFVGG
YGGSGFPVCPPGGIQEVTINQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKV
RFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRS
MQDLVEDFKNKYEDEINKRTAAENEFVNLKKDVDTAYMNKVELQAKVDSLTDEINFLRAF
YDAELAQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAQRSRAEAESWYQSKYE
ELRVTAGRHGDDLRNTKQEISEINRMIQRLRSEIDHVKKQCASLQSAIADAEQRGEMALK
DARNKLAELEDALLKAKQDMARLLKEYQELMNAKLALDVEIATYRKLLEGEECRLNGEGV
GQVNISVVQSTVSSGYGGASGVGSGLGLGGGSGYSYSSGHGLGGGFSSGSGRAIGGGLSS
SGGSSSTIKYTTTTSSSSSRKGYRH
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgtcttgcaaatccatcgtgaggagccaaagcagcggccgccggggcttcagtgccagc
tcagccagagtccccggggtctgccgctctggcttcagcactgtctccgtgtcccgctcc
aggggcagtggcggcctgtctggagtgtgtggaggagctggttttggcagccgcagcctc
tatagcctggggggctccaagaggatctccatcggagggggcagttgtgtcattggtggt
ggatatggcggcggagttggggctggcttcggctttggaggtggagccaggagtggattt
ggttttggtgctggtagtggtggctttgggctcggtggtggagctggctttgttgggggc
tatgggggctctggcttccctgtgtgcccccccggaggcatccaagaggtcaccatcaac
cagaatctcctcacccctctgaacctgcaaatcgaccccaccatccagcgggtgaggacc
gaggagcgggagcagatcaagaccctcaacaacaagttcgcctccttcatcgacaaggtc
cgattcctggagcagcagaacaaggtcctggacaccaagtggaccctgctgcaggagcag
ggcaccaagactgtcaggcagaacctggagcctttgttcgagcagtacatcaacaacctt
aggagacagctggacagcatcctgggggagagaggccgcctggactcagagctgaggagc
atgcaggacctggtggaggacttcaagaacaagtatgaagacgagatcaacaagcgcaca
gcggccgagaatgaatttgtgaatctgaagaaggatgtggatactgcctacatgaataag
gttgaactacaagccaaggtcgactctctcacagatgagatcaacttcctaagagccttc
tatgacgcagaactggctcagatgcaaacccacatctcagacacgtctgtggtcctctcc
atggacaacaaccgcaacctggacctggacagcatcatcgctgaagtcaaagcccaatat
gaggacattgctcagaggagccgggctgaggctgagtcctggtaccagtccaagtatgag
gagctgcgggtcacagcgggcaggcacggagatgacctgcgcaacaccaagcaggagatc
tccgagatcaaccgcatgatccagaggctgcggtctgagatcgaccacgtcaagaagcag
tgcgccagcctgcagtctgccatcgctgatgccgagcagcgtggggagatggccctcaag
gatgccaggaacaagctggccgagctggaggatgccctgcttaaggccaagcaggacatg
gccaggctgctgaaggagtaccaggagctcatgaacgccaagctggccctggacgtggag
attgccacctacaggaagctgctggaaggcgaggagtgcaggctgaatggggaaggcgtt
ggacaagtcaacatctctgtggtgcagtccaccgtctccagcggctatggcggtgccagc
ggtgtcggcagtggcttgggcctgggtggaggcagtggctactcctacagcagtggtcac
ggccttggaggtggcttcagttctggcagtggcagagccataggaggtggcctcagctcc
tctgggggcagcagttccaccatcaaatacaccaccaccacctcctcctcttctagcagg
aagggctacaggcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (18)   
   Pfam (18)   
All databases (48)   

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