KEGG   Sus scrofa (pig): 396554Help
Entry
396554            CDS       T01009                                 

Gene name
COMP
Definition
cartilage oligomeric matrix protein
Orthology
K04659  
thrombospondin 2/3/4/5
Organism
ssc  Sus scrofa (pig)
Pathway
Phagosome
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Malaria
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    396554 (COMP)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    396554 (COMP)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    396554 (COMP)
  Cellular commiunity
   04510 Focal adhesion
    396554 (COMP)
 Human Diseases
  Infectious diseases
   05144 Malaria
    396554 (COMP)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   396554 (COMP)
  Exosomal proteins of colorectal cancer cells
   396554 (COMP)
  Exosomal proteins of bladder cancer cells
   396554 (COMP)
Heparan sulfate/heparin binding proteins [BR:ssc00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  396554 (COMP)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
UniProt: 
Position
2
AA seq 756 aa AA seqDB search
MVLTVARVLLITLAALGASGQGQITLGADLGPQMLRELQETNAALQDVRELLRQQVKEIT
FLKNTVMECDACGMQPARTPRLSVRPLSQCAPGFCFPGVACTETASGARCGPCPAGFTGN
GSHCADVNECNAHPCFPRVRCINTSPGFRCEACPPGYSGPTHEGVGLAFAKANKQVCTDI
NECETGQHNCVPNSVCVNAVGSFQCGPCQPGFVGDQASGCRRRSQRFCPDGTPSPCHEKA
DCVLERDGSRSCVCAVGWAGNGILCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQE
DVDRDGIGDACDPDADGDGVLNEQDNCPLVRNPDQRNADGDKWGDACDNCRSQKNDDQKD
TDQDGRGDACDDDIDGDRIRNTVDNCPRVPNSDQKDSDGDGIGDACDNCPQKSNADQRDV
DHDFVGDACDSDQDKDGDGHQDSRDNCPTVPNSAQQDSDHDGQGDACDDDDDNDGVPDSR
DNCRLVPNPGQEDVDRDGVGDACQGDFDADKVVDKIDVCPENAEVTLTDFRAFQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTA
SQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTTMRGGR
LGVFCFSQENIIWANLRYRCNDTIPEDYEAQRLLQA
NT seq 2271 nt NT seq  +upstreamnt  +downstreamnt
atggttctcaccgtcgcccgcgttctcttgatcaccctggcggccctcggcgcatccggc
cagggtcagataacgctgggtgcagacctgggcccgcagatgctgcgagaactacaggag
accaacgcggcgctgcaggatgtgcgggagctgctgaggcagcaggtcaaggagatcacg
ttcctgaaaaacacggtgatggagtgtgacgcgtgcgggatgcaacccgcgcgcaccccg
aggctgagcgtgcggcccctaagccagtgcgcgcccggcttctgcttcccgggagtggct
tgtaccgagacggcgagtggcgcgcgctgtggaccctgccccgcaggtttcacaggcaac
ggctcgcactgcgcggacgtcaacgagtgcaacgcccatccctgcttcccccgcgtccgc
tgcatcaataccagtccaggcttccgctgtgaggcttgcccacccgggtacagcggcccc
acccacgagggcgtggggctggcctttgccaaggccaacaagcaggtttgcacggatatt
aatgagtgtgagaccgggcagcataactgcgtccccaactccgtatgcgtcaatgccgtg
ggctccttccagtgcggtccgtgccagcccggcttcgtgggcgaccaggcatcaggctgc
cgtaggcgctcacagcgcttctgtccagacggcacgcccagcccgtgccacgagaaggcc
gactgcgtcctggagcgtgatggatcgcgatcgtgcgtgtgcgctgtcggctgggcgggc
aacgggatcctctgtggccgggacacagacttggacggctttccggatgagaagctgcgc
tgctcagagcgccagtgccgaaaggacaactgcgtgacggtgcccaactcagggcaggag
gacgtggatcgcgacggcatcggagatgcttgcgacccggatgccgacggggacggcgtc
ctcaatgagcaggacaactgcccgctggtgcggaacccagaccagcgcaatgcggatggc
gacaagtggggcgatgcgtgcgacaactgccggtctcagaagaacgacgaccagaaggac
acagatcaggacggcagaggcgacgcctgcgacgacgacatagacggcgaccggatccgc
aacacggtggacaactgccccagggtgcccaattcagaccagaaggacagtgatggtgat
ggtataggggatgcctgtgacaactgtcctcagaagagcaatgcagatcagagggatgtg
gaccacgactttgtgggagatgcatgtgacagcgaccaagacaaggatggagatgggcat
caggactctcgagataactgccccacagtgcctaacagcgcccaacaagactcagaccac
gatggtcagggtgatgcctgtgacgacgatgatgacaatgatggggtccctgatagtcgg
gacaactgccgcctggtgcccaaccccggccaggaagacgtggaccgggacggcgtgggg
gacgcgtgccaaggggactttgatgcggacaaggtggtagacaagattgatgtgtgtccg
gagaatgctgaggtcaccctcaccgacttcagggccttccagaccgtcgtgctggaccca
gagggcgacgcgcaaatagaccccaactgggtggtgctcaaccaggggatggagatcgtg
cagacgatgaacagtgaccctggcctggctgtgggttacacggccttcaatggcgtggac
ttcgaaggcacattccacgtgaacacagtcacggatgacgactacgcgggtttcatcttt
ggctaccaagacagttccagcttctatgtggtcatgtggaagcagatggagcagacatac
tggcaggcaaaccccttccgcgccgtggcggagcctggcatccagctcaaggccgtgaag
tcctccacaggccctggggagcagcttcgaaacgccctgtggcacacaggggacacagca
tcacaggtgcggctgctgtggaaggacccccgcaacgtgggctggaaggacaagacatcc
taccgctggttcctacagcaccggccccaagtgggctacatcagagtgcggttctatgag
ggccctgagctggtggcagacagcaatgttgtcctggatacaaccatgcggggcggccgc
ttgggagtcttctgcttctcccaggagaacatcatctgggctaacctgcggtaccgctgc
aatgacaccatcccggaggattacgaggcccagcggctgctgcaggcctaa

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