KEGG   Sus scrofa (pig): 396595Help
Entry
396595            CDS       T01009                                 

Gene name
PRF1
Definition
perforin 1 (pore forming protein)
Orthology
K07818  
perforin 1
Organism
ssc  Sus scrofa (pig)
Pathway
Natural killer cell mediated cytotoxicity
Type I diabetes mellitus
Autoimmune thyroid disease
Allograft rejection
Graft-versus-host disease
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Organismal Systems
  Immune system
   04650 Natural killer cell mediated cytotoxicity
    396595 (PRF1)
 Human Diseases
  Immune diseases
   05320 Autoimmune thyroid disease
    396595 (PRF1)
   05330 Allograft rejection
    396595 (PRF1)
   05332 Graft-versus-host disease
    396595 (PRF1)
  Cardiovascular diseases
   05416 Viral myocarditis
    396595 (PRF1)
  Endocrine and metabolic diseases
   04940 Type I diabetes mellitus
    396595 (PRF1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
14
AA seq 555 aa AA seqDB search
MASPVLLLSILLLLLPTPAPAPCYTAARSECRRKLKFVPGAWLAGEGMDVTSLQRSRSFP
VDTQHYLRPDGTCTLCQNALQGGVLQRLPLALTSWRAQGTSCKRKVLREEGRSTEEVAKE
AASNIRNDWRVGLDVTPKPSTNVQVTVAGSHSQAANFAAQKTHQDQYRFSLDSVECRFYS
FHLVHTPPLHPEFKKALRTLPPHFNTSTEPDYLRLISSYGTHFIQSMDLGGRITALTALR
TCELALEGLTSKEVEDCLSVEAEVSISGRASSSAAYKACEDKKKQHKMGSSFHQAYRERH
SEVLGGHHTFTHDLLFGNQAGPEQFSAWVASLPDSPDLVDYTLEPLHVLLESQDPRREAL
RQAVSKYVTDRARWKDCSRPCPPGQRKSPQDPCQCVCHGSSATNQDCCPRQRGLARLVVM
NFVATGLWGDYFTATDAYLKVFFGGQELRTSTMWNNNHPQWMIHLDFGDVLLSTGGPLRV
QVWDADYGWDDDLLGTCDRTPQSGSHEVMCALNHGHLKFSYHAKCLPHLTGGKCLEYAPP
GLLGEPLGNRSGAVW
NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt
atggcctccccagtgctcctcctcagcatcctcctcctgctgctgcccacgcccgccccc
gccccctgctacacggctgcgcgctctgagtgccgacgcaaactcaagttcgtgccaggc
gcctggctggcgggggagggcatggatgtgaccagcctccagcgttcacgctcctttccg
gtggacacacagcactacctgcgacctgacggcacctgcaccctctgccaaaatgctctg
caggggggcgttctccagcgcctgcccctggcgctcaccagctggcgcgcccagggcacc
agctgcaagcgcaaagtgctcagagaagagggccgctccaccgaggaggtggctaaggag
gcagccagcaatatccgcaacgactggcgggtagggctggacgtgactcccaagcccagc
accaatgtgcaggtgaccgtggcgggctcccactcccaggcagccaacttcgcggcccag
aagactcaccaggaccagtaccgcttcagcctggactcagtggagtgtcgcttctacagt
tttcacctggtgcacacgcccccgctccaccctgagttcaagaaggccctcaggacgctg
cccccccacttcaacacctccaccgagcccgactacctgaggctcatctccagctacggc
acccacttcatccagtccatggacctgggtggccgcatcacggccctcactgccctgcgc
acctgcgagctggccctggaagggctcacatccaaggaggtggaggactgcttgtccgtc
gaagctgaggtcagcataagtggccgagccagctcctcggcggcgtacaaggcgtgtgag
gacaagaagaagcagcacaagatggggtcctccttccaccaggcctaccgggaacgccat
tctgaagtccttgggggccaccacacgttcacacacgacctgttgttcgggaaccaggct
gggcctgagcagttctcggcctgggtggcctcattgccggacagccccgacctggtggac
tacacactggagcccctgcacgtgctgctggagagccaggacccgcgtcgggaggcactc
cggcaggcggtgagcaagtatgtgacggacagggcgcgctggaaggactgcagccgcccg
tgccccccgggacagcggaagagcccccaggacccatgccagtgcgtgtgccatggctca
tcggccaccaatcaggactgctgtccccggcagaggggcctggcccggctggtggtcatg
aacttcgtggcgacggggctgtggggagactatttcactgccacggacgcctatctgaag
gtcttctttggtggccaggagctgcggaccagcaccatgtggaacaataaccatccccag
tggatgatacatctggacttcggggatgtgctcctgtccacgggggggcccctgagggta
caggtctgggacgcggactatggctgggacgatgaccttcttggcacctgcgaccggaca
ccacagtctggctcacacgaggtgatgtgcgccttgaaccatggccacctgaaattctcc
taccatgccaagtgcttgcctcacctgaccggggggaagtgcctggagtacgcccccccg
gggcttctgggggagcctctgggaaaccggagcggggcagtgtggtga

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