KEGG   Sus scrofa (pig): 397395
Entry
397395            CDS       T01009                                 
Symbol
CD40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 precursor
  KO
K03160  tumor necrosis factor receptor superfamily member 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04064  NF-kappa B signaling pathway
ssc04514  Cell adhesion molecules
ssc04620  Toll-like receptor signaling pathway
ssc04672  Intestinal immune network for IgA production
ssc05144  Malaria
ssc05145  Toxoplasmosis
ssc05166  Human T-cell leukemia virus 1 infection
ssc05169  Epstein-Barr virus infection
ssc05202  Transcriptional misregulation in cancer
ssc05310  Asthma
ssc05320  Autoimmune thyroid disease
ssc05322  Systemic lupus erythematosus
ssc05330  Allograft rejection
ssc05340  Primary immunodeficiency
ssc05416  Viral myocarditis
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    397395 (CD40)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    397395 (CD40)
   04514 Cell adhesion molecules
    397395 (CD40)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    397395 (CD40)
   04672 Intestinal immune network for IgA production
    397395 (CD40)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    397395 (CD40)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    397395 (CD40)
   05169 Epstein-Barr virus infection
    397395 (CD40)
  09174 Infectious disease: parasitic
   05144 Malaria
    397395 (CD40)
   05145 Toxoplasmosis
    397395 (CD40)
  09163 Immune disease
   05310 Asthma
    397395 (CD40)
   05322 Systemic lupus erythematosus
    397395 (CD40)
   05320 Autoimmune thyroid disease
    397395 (CD40)
   05330 Allograft rejection
    397395 (CD40)
   05340 Primary immunodeficiency
    397395 (CD40)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    397395 (CD40)
   05416 Viral myocarditis
    397395 (CD40)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:ssc04050]
    397395 (CD40)
   04090 CD molecules [BR:ssc04090]
    397395 (CD40)
Cytokine receptors [BR:ssc04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   397395 (CD40)
CD molecules [BR:ssc04090]
 Proteins
  397395 (CD40)
SSDB
Motif
Pfam: TNFR_c6 RANK_CRD_2 Syndecan
Other DBs
NCBI-GeneID: 397395
NCBI-ProteinID: NP_999359
Ensembl: ENSSSCG00000007440
Vega: OTTSUSG00000001712
UniProt: Q8SQ34
Position
17:48286116..48298188
AA seq 278 aa
MVRLPLKCLLWGCFLTAVHPEPPTSCKENQYPTNSRCCNLCPPGQKLVNHCTEVTETECL
PCSSSEFLATWNREKHCHQHKYCDPNLGLQVQREGTSKTDTTCVCSEGHHCTNSACESCT
LHSLCFPGLGVKQMATEVSDTICEPCPVGFFSNVSSASEKCQPWTSCESKGLVEQRAGTN
KTDVVCGFQSRMRALVVIPITLGILFAVLLVFLCIRKVTKEQETKALHPKTERQDPVETI
DLEDFPDSTAPVQETLHWCQPVTQEDGKESRISVQERE
NT seq 837 nt   +upstreamnt  +downstreamnt
atggttcgtctgcctctgaagtgtctcctctggggctgctttttgaccgccgtccaccca
gaaccacccacttcatgcaaagagaaccaatacccaacaaacagccggtgctgtaatttg
tgcccgccaggacagaaactggtgaaccactgcacagaggtcactgaaacagaatgcctt
ccttgcagttccagcgaattcctagccacctggaatagagagaaacactgtcatcagcac
aaatactgcgaccccaacctaggtctccaggtccagagggagggcacctcgaaaacagac
accacttgtgtgtgcagtgaaggccatcactgtaccaacagcgcctgtgaaagttgcacc
ttgcacagcttgtgcttccctggcctcggggtcaagcagatggcgacagaggtttctgac
actatctgtgaaccctgcccagttggcttcttctccaatgtatcatctgcttcagaaaag
tgtcagccttggacaagctgcgagagcaaaggcctggtggaacaacgtgcggggactaac
aagaccgatgttgtctgtggtttccagagtcggatgagagccctggtggttatccccatc
acgctggggatcctgtttgccgtcctgttggtatttctctgtatcagaaaggtgaccaag
gagcaggagactaaggccctgcaccctaagactgaaaggcaggatcccgtggagacgatt
gatctggaggattttcccgactccaccgctccggtgcaggagaccttacattggtgccag
cccgtcacccaggaggatggcaaagagagccgcatctccgtgcaggagcgagagtga

DBGET integrated database retrieval system