KEGG   Sus scrofa (pig): 397437
Entry
397437            CDS       T01009                                 
Symbol
RHO
Name
(RefSeq) rhodopsin
  KO
K04250  rhodopsin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    397437 (RHO)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ssc04030]
    397437 (RHO)
G protein-coupled receptors [BR:ssc04030]
 Rhodopsin family
  Vision
   Opsin
    397437 (RHO)
SSDB
Motif
Pfam: 7tm_1 Rhodopsin_N 7TM_GPCR_Srv 7TM_GPCR_Srw 7TM_GPCR_Srsx 7TM_GPCR_Srx TAS2R
Other DBs
NCBI-GeneID: 397437
NCBI-ProteinID: NP_999386
Ensembl: ENSSSCG00000011590
UniProt: O18766
Position
13:68908578..68913651
AA seq 348 aa
MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFMLIVLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIP
EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFSIPLVIIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSDFGPIFMTIPAFFAKSASI
YNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTTSKTETSQVAPA
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaatgggacggagggcccaaacttctacgtgcctttctccaacaagacgggcgtggtg
cgcagcccctttgagtatccgcagtactacctggctgagccatggcagttctccatgctg
gctgcctacatgttcatgctgattgtgcttggcttccccatcaacttcctcacgctctac
gtcacggtccagcacaagaagctgcgcacacccctcaactacatccttctcaacctggca
gtggctgacctcttcatggtcttcggaggcttcaccaccaccctctacacctctctgcat
ggatacttcgtctttggacccacaggatgcaacttggagggattctttgccaccctgggc
ggtgaaatcgccctgtggtccttggtggtcctggccattgaacggtacgtggtggtgtgt
aagcctatgagcaacttccgcttcggggagaaccacgccatcatgggcctggccctcacc
tgggtcatggctctggcctgcgctgcgccccctctcgtcggctggtccaggtacatccca
gaaggcctgcagtgctcgtgcgggattgactactacacactcaagccggaggtcaacaat
gagtccttcgtcatctacatgttcgtggtccacttctccatccccttggtcatcatcttc
ttctgctatgggcagctggtcttcacagtcaaggaggctgccgcccagcagcaggagtca
gccaccacacagaaggccgagaaggaggtcactcgcatggtcatcatcatggtcgtggct
ttcctgatctgctggctgccctacgccagtgtggcattctacatcttcacccaccagggc
tccgactttggccccatcttcatgaccatcccagccttctttgccaagagcgcctccatc
tacaaccccgtcatctatatcatgatgaacaagcagttccggaactgcatgctcaccacg
ctctgctgtggcaagaacccactgggtgatgacgaggcctccaccaccacttccaagaca
gagaccagccaggtggcaccagcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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