KEGG   Sus scrofa (pig): 492313Help
Entry
492313            CDS       T01009                                 

Gene name
THBS1
Definition
thrombospondin 1
Orthology
K16857  
thrombospondin 1
Organism
ssc  Sus scrofa (pig)
Pathway
Rap1 signaling pathway
p53 signaling pathway
Phagosome
PI3K-Akt signaling pathway
TGF-beta signaling pathway
Focal adhesion
ECM-receptor interaction
Malaria
Proteoglycans in cancer
MicroRNAs in cancer
Bladder cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Environmental Information Processing
  Signal transduction
   04015 Rap1 signaling pathway
    492313 (THBS1)
   04350 TGF-beta signaling pathway
    492313 (THBS1)
   04151 PI3K-Akt signaling pathway
    492313 (THBS1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    492313 (THBS1)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    492313 (THBS1)
  Cell growth and death
   04115 p53 signaling pathway
    492313 (THBS1)
  Cellular commiunity
   04510 Focal adhesion
    492313 (THBS1)
 Human Diseases
  Cancers
   05206 MicroRNAs in cancer
    492313 (THBS1)
   05205 Proteoglycans in cancer
    492313 (THBS1)
   05219 Bladder cancer
    492313 (THBS1)
  Infectious diseases
   05144 Malaria
    492313 (THBS1)
Heparan sulfate/heparin binding proteins [BR:ssc00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  492313 (THBS1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Vega: 
UniProt: 
Position
1
AA seq 1170 aa AA seqDB search
MGLAWGLSVLFLLHVCGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQVFSVV
SNGKAGTLDLSLTVQGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD
VPIQSIFTRDLASIANLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL
TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK
VTEENKELASELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN
ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT
RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE
TKACQRDACPINGGWGPWSPWDICSVTCGGGVQRRSRLCNNPAPQFGGKDCVGDETENQI
CNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCEDVDECKEVPDACF
NHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRSVEYATANKQVCKPRNPCTDGTHDCNKN
AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN
LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN
HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH
NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN
DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRRF
QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD
DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL
WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD
KTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt
atggggctggcctggggactcagtgtcctgtttctgttgcatgtgtgtggctccaaccgc
attccagagtctgggggagacaacagcgtctttgacatctttgaactcaccggggctgcc
cgaaagggctctgggcgccgactagtgaagggtcctgacccttccagcccagctttccgc
attgaggatgccaacctgatcccccctgtccctgatgacaagttccaagacctagtggat
gctgtgcgagcagagaaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc
cggggcacgctgctggccgtggagcggaaagaccattctggccaggtcttcagcgtggtc
tccaacggcaaggcgggcaccctggacctgagcctgaccgtgcaggggaagcagcaggtg
gtgtcagtggaggaagccctcctggccactggtcagtggaagagcatcaccctatttgtg
caggaggacagggcccagctgtacatcgactgcgagaagatggagaatgccgagctggac
gttcccatccaaagcatcttcaccagggacctggccagcatcgccaatctccgcatcgca
aaaggaggtgtcaatgacaattttcagggggtgctgcaaaacgtgaggtttgtctttgga
accacaccagaagacatcctcaggaacaaaggttgctccagctctaccaatgtccttctc
accctggacaacaatgtggtgaatgggtccagccccgccatccgcaccaactacattggc
cacaagacgaaggatctgcaagccatctgcggcatctcctgtgatgagctgtccagcatg
gtcctggagctcaggggcctgcgcaccattgtgaccacgctgcaggacagcatccgcaaa
gtgactgaagagaacaaagagttggccagtgagctgaggaggccccccctctgctaccac
aacggagtccagtataggaataacgaggagtggacagtggacagctgcactgagtgtcgt
tgtcagaactcagttaccatctgcaaaaaagtgtcctgccccatcatgccctgctctaat
gccacagttcctgatggagaatgctgccctcggtgttggcccagcgactctgctgacgat
ggctggtccccatggtctgagtggacctcttgctctgtgacgtgtggcaatggcatccag
cagcgtggccgctcctgtgacagcctcaacaacagatgcgagggctcctccgtgcagact
cggacctgccacattcaggagtgtgacaagagatttaaacaggacggcggctggagccac
tggtccccgtggtcgtcttgttctgtcacatgtggagatggtgtgatcacaaggatccgg
ctctgcaactctcccagtccccaaatgaatgggaagccatgtgagggtgaagctcgggag
accaaagcctgccagagagacgcctgccccatcaatggaggctggggaccctggtcacca
tgggacatctgttccgtcacctgtggaggaggggtacagagacgtagccggctctgtaac
aaccccgcaccccagtttggaggcaaggactgcgttggtgatgagacagaaaatcagatc
tgcaacaagcaggactgtcccattgatggatgcctgtccaatccttgctttgctggtgcc
aagtgtaccagctaccctgatggcagctggaagtgcggtgcttgtccccctggctacagt
ggaaatggcatccagtgcgaagatgttgatgagtgcaaagaagtccctgatgcctgcttc
aaccacaatggagagcacaggtgtaagaacacagatcccggctacaactgcctgccctgc
ccaccacgtttcactggctcccagccctttggccgcagtgtggaatacgccaccgccaac
aaacaggtgtgcaagccccgtaacccctgcacagatgggacgcatgactgtaacaagaat
gccaagtgcaactacctcggccactacagcgacccgatgtaccgctgcgagtgtaagcct
ggttacgcgggcaatggcatcatctgtggggaggacacggacctggacggctggcccaac
gaggacctggtgtgcgtggccaatgcaacttaccactgcaaaaaggataattgccccaac
cttcccaactcagggcaggaagactatgacaaggatggaatcggcgatgcctgcgatgat
gacgatgacaatgataaaattccagatgacagggacaactgtccattccattacaaccca
gcccagtacgactatgacagagatgatgtgggagaccgctgtgacaattgcccctacaac
cacaacccagaccaggccgacacagacaacaatggggaaggagacgcctgcgcggctgac
attgatggggatggtatcctcaacgaacgagacaactgccagtatgtctacaacgtggac
cagagagacaccgacatggatggggttggcgatcagtgtgacaactgccccttggaacac
aatccggatcagcttgactctgactcagaccgcattggagatacctgtgacaacaatcag
gatattgatgaagatggccatcagaacaacctggacaactgtccctatgtgcccaacgcc
aaccaggctgaccacgacaaggatggcaagggtgatgcctgcgaccatgacgacgacaat
gatggcatccctgatgacagggacaactgccggcttgtgcccaatcctgaccagaaggat
tctgatggggatggtcgaggtgatgcttgcaaagatgattttgaccatgacaatgtgcca
gacatcgatgacatctgtcctgaaaatgttgacatcagtgagactgatttccgccgattc
cagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgtacgc
catcagggtaaagaactcgtccagactgtcaactgtgaccctggacttgctgtaggttat
gatgagtttaacgctgtggacttcagtggcacctttttcatcaacaccgaaagggatgat
gactatgctggatttgtgtttggctaccagtccagcagccgtttctatgttgtgatgtgg
aagcaagtcactcagtcttactgggacaccaatcccacaagggctcaggggtactcaggc
ctttctgtgaaggttgtgaactccaccacagggcctggtgagcatcttcggaacgccctg
tggcacacaggaaacacccccggccaggtgcgtaccctgtggcatgatcctcgtcacata
ggctggaaagatttcactgcctacagatggcgtctcagtcacagaccaaagacaggtttc
attcgtgtggtgatgtatgaagggaagaaaatcatggcagactcaggacccatctatgac
aaaacctatgccggtggtaggctagggttgttcgtcttctctcaagaaatggtgttcttt
tccgacctgaaatatgaatgcagagattcctaa

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