KEGG   Sus scrofa (pig): 595116
Entry
595116            CDS       T01009                                 
Symbol
RAB1A
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04140  Autophagy - animal
ssc05014  Amyotrophic lateral sclerosis
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    595116 (RAB1A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    595116 (RAB1A)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    595116 (RAB1A)
   05022 Pathways of neurodegeneration - multiple diseases
    595116 (RAB1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    595116 (RAB1A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    595116 (RAB1A)
   04031 GTP-binding proteins [BR:ssc04031]
    595116 (RAB1A)
Membrane trafficking [BR:ssc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    595116 (RAB1A)
 Autophagy
  Other autophagy associated proteins
    595116 (RAB1A)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   595116 (RAB1A)
  Exosomal proteins of other body fluids (saliva and urine)
   595116 (RAB1A)
  Exosomal proteins of colorectal cancer cells
   595116 (RAB1A)
GTP-binding proteins [BR:ssc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    595116 (RAB1A)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB AAA FeoB_N AAA_7 AAA_29 ABC_tran Septin AAA_16 AAA_22 PduV-EutP AAA_5 TniB CRAL_TRIO_2
Other DBs
NCBI-GeneID: 595116
NCBI-ProteinID: NP_001026957
Ensembl: ENSSSCG00000008359
UniProt: Q52NJ2
Position
3:76837673..76868156
AA seq 205 aa
MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
TAGGAEKSNVKIQSTPVKQSGGGCC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtccagcatgaatcccgaatatgattatttattcaagttacttctgattggcgactct
ggggttggaaagtcttgcctccttcttaggtttgcagatgatacatatacagaaagctat
atcagcacaattggtgtggatttcaaaataagaactatagagttagatgggaaaacaatc
aaacttcaaatatgggacacagcaggccaagaaagatttcgaacaatcacctccagttac
tacagaggagcccatggcatcatagttgtgtatgatgtgacagatcaggggtccttcaat
aacgttaaacagtggctacaagaaatagatcgttatgccagtgaaaacgtcaacaagttg
ttggtagggaacaaatgtgatttgaccacaaagaaagtagtagactacacaacagcaaag
gaatttgctgattcccttggaattccatttttggaaaccagtgctaagaatgcaacgaat
gtagaacagtctttcatgacgatggcagctgagattaaaaaacgaatgggtcctggagca
acagctggcggtgcagagaagtccaatgttaaaattcagagcactccagtcaagcagtca
ggtggaggctgctgctaa

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