KEGG   Staphylococcus schleiferi 1360-13: LH95_03725
Entry
LH95_03725        CDS       T04012                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
ssch  Staphylococcus schleiferi 1360-13
Pathway
ssch03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LH95_03725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssch03019]
    LH95_03725
   03009 Ribosome biogenesis [BR:ssch03009]
    LH95_03725
Enzymes [BR:ssch01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     LH95_03725
Messenger RNA biogenesis [BR:ssch03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LH95_03725
Ribosome biogenesis [BR:ssch03009]
 Prokaryotic type
  rRNA helicases
   LH95_03725
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Flavi_DEAD CMS1 AAA_30 SUa-2TM AAA_22
Other DBs
NCBI-ProteinID: AKS66628
UniProt: A0A0K0ZZG7
Position
828140..829627
AA seq 495 aa
MQNFTNLGVSERTAETLEAMGFTEPTPIQKDSIPYALENIDILGQAQTGTGKTGAFGIPL
IEKVIGKEGVRALILAPTRELAMQVAEQLREFSRGQKVQVVTVFGGMPIDRQIKSLKRGP
QIVVGTPGRVIDHLNRRTLKTQSIETLILDEADEMMNMGFIDDMRYIMDKLPSENRQTML
FSATMPKAIQELVQKFMKSPRIIKTMNNEISDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKHGIAVTFVNPIEMDYIRQIEQTNR
RQMRALRPPHRKEVLKAREDEIKSKVQNWMEADKEPRVENIAKQLLETYDQTELVTALLQ
ELVESNDEVEVQLTFEKPLARKNRSPKGNRKVGNNKRHSKSNRNFKQNNNNKKGNFKHKR
ETKVKKGRTFADHQK
NT seq 1488 nt   +upstreamnt  +downstreamnt
ttgcaaaattttacaaatttaggtgtttcagaacgtacagctgaaaccctcgaggcaatg
ggttttacagagccgacacccatccaaaaagatagtatcccatatgcactcgaaaacatc
gatatattaggacaagcgcaaactggaacagggaaaacaggtgcgtttggtattccactt
attgaaaaagtaattggaaaagaaggtgtgcgtgctttgatcttagcacctacacgtgaa
ttagcgatgcaagtggctgaacaattaagagaatttagtcgtgggcaaaaagttcaagtt
gtcactgtttttggcggtatgccaattgatcgtcaaatcaaatctttaaaacgcggacca
caaatcgttgtagggacacctgggcgtgtgattgatcaccttaatcgtcgtactttaaaa
acgcaatctatcgaaacattaattttggacgaagcagatgaaatgatgaatatgggcttc
atcgatgatatgcgttatattatggataaattaccgtctgaaaaccgtcaaacaatgttg
ttctcagcaacaatgccaaaggcaatacaagaattggttcaaaaattcatgaaatcacca
agaattattaaaacgatgaacaatgaaatttctgatccacaaattgacgagtattataca
attgtgaaagagttagagaaatttgatacgtttacgaacttcttagacgttcatcaacct
gaattggctattgtatttggacgtacaaaacgtcgtgtagatgaattaacaagtgcatta
ttatctaaaggttataaagcagaaggtttacacggtgatattactcaggcgaaacgtctt
gaagttttgaaaaaatttaaaaatgatcaaattgatattttagtagctacagatgtggca
gcgagaggacttgatatttcaggtgtaagccacgtatataactttgatatccctcaagat
actgaaagctatacacaccgtattggccgtacaggacgtgcaggtaaacatggtatcgct
gttacttttgttaacccaattgaaatggattatatccgtcaaatcgagcaaacgaatcgc
cgtcaaatgcgcgcattaagaccgccacatcgtaaagaagttttaaaagcacgcgaagat
gaaataaaaagtaaggttcaaaattggatggaagctgataaagaaccacgtgtagaaaat
attgcgaaacagttattagaaacttacgatcaaactgaacttgtcacagcattattgcaa
gaacttgttgaatcaaatgatgaggttgaagtacaacttacatttgaaaaacctttagca
cgtaaaaatcgttcgccaaaaggaaatcgaaaagtaggcaataataagcgtcactctaaa
tcaaatcgcaattttaaacaaaacaataacaacaaaaaaggtaacttcaaacataaaaga
gaaacaaaagtgaagaagggccgcacttttgcagatcatcaaaaatag

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