KEGG   Staphylococcus schleiferi 2317-03: RN70_09405
Entry
RN70_09405        CDS       T04520                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
sscz  Staphylococcus schleiferi 2317-03
Brite
KEGG Orthology (KO) [BR:sscz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sscz03400]
    RN70_09405
Enzymes [BR:sscz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RN70_09405
DNA repair and recombination proteins [BR:sscz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     RN70_09405
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DEAD ResIII AAA_12 NACHT
Other DBs
NCBI-ProteinID: AKS74099
Position
complement(2007949..2011593)
AA seq 1214 aa
MIPKKPNDVQWTDAQWESIYAKGQDVLVAAAAGSGKTAVLVERIIQRILRDHIDVDRLLV
VTFTNLSAREMKQRVEARIQQAAIEDPTNQHLKNQRAKIHQAQISTLHSFCLKLIQQHYD
ELEIDPNFRTASEVENVLLLEEVIDQVFETHYTRLDPTFVTLAEHISTDRDDAALRQMVK
NLYYFSIANPDPMDWLDRLERPYLEAHLQQHYLDILNKYILLYLEAAQNAIEEAYQQLEM
IGDYPKHTDFIDQHRQFIRQIRLDDQLNKKLIFEYQFGRMPTKPKAVREDESLNEAYDIF
KSNYDQFKDYLSQVQTLFVGREDDTLLKELKDLAPRVKYLSVLTQDVIHAFREAKKARNI
LDFSDYEHYALEILLNEDGTPSEIAEIYRQRFDEILVDEYQDTNRVQEKIIASIKRGNES
NGNLFMVGDVKQSIYKFRQADPSLFIEKYQRFNQQDQSSGWRIDLSQNFRSRSEVLATTN
YLFEHMMDTEVGEIEYDAAAKLYYGAPYDEVDMPVQFNIFMVDENIEHTASEQEAYGIAE
QVEAILKTKKVYDMKTGTYRPAQYKDIVILERSYSNARNIQQVFKDKDIPLFVNSKQGYF
EQTEIRLMLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELAKIRVVAPKEDYFYQSIQQY
LQYEDAEPMLVGKLERFLSDLEAYQSFSLSHPVYQLIDKLYNDHYIIQYFSGLIGGKGRR
ANLHGLFNKAVEFENSSFRGLFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSSK
GLEFPFVIYSGLTREFNTNDLGKPVVLNQHEGLGLQYYDASKGLFYPSLISMSIDLINKK
ELISEEMRLIYVALTRAKEQLFLIGTAKQEKHLQQLATSSITNGKLTAIERFNAKNPFSL
IYSVLSKYQNNALLKHQRFESDNETLDASIEPKVIQQHILAEEILPVDAESAQQFDHSLE
ALETKLAQEPSNEAIQLQIEQQLLFSYPYQEAILKASKQSVSELKRQLETEQADTNYERV
RQYRLGVATYERPQFLQEEKQTAAEFGTLMHTVMQHLPFKKEGLSEADLNYYLDSLVEQS
IIDHASRRLVKTNDIQTFINSKLYRRIAESDEVYTEIPFVVNQAHVESKANQEEPSIIQG
MIDLVFKESGQYYFVDYKTDALMKRKGMSDEAFGESLKNKYRVQMTYYQRALETLLKSPV
SGSLYFFQYGELKI
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgattcctaaaaagccaaatgatgtgcaatggacagatgcacagtgggaaagtatctat
gctaaaggtcaagatgtactcgttgctgctgcagcgggttccggtaaaaccgcggtactg
gtagaacgtattattcaaaggattttacgggatcatattgatgtggatcgcctccttgtt
gttacgtttacgaatcttagtgcgcgagagatgaaacaacgtgtagaagcacgcattcag
caagctgcgatagaggatccgaccaatcagcatttgaagaatcaacgtgctaaaatacat
caagctcaaatttcaacgttacacagtttttgcttgaaactgattcaacaacattatgat
gaattggaaattgacccaaattttcgaacagccagtgaagtagaaaacgttttgctacta
gaggaagtgattgatcaagttttcgaaacgcattatacgcggttggaccctacatttgtc
acattagcagaacatatttcgacagatcgagatgacgctgcattaagacaaatggttaaa
aatctctattactttagtattgcaaatccagatccaatggattggttagatcgtctggaa
cggccatatcttgaagcgcatttacaacaacattatttagatattttaaataagtatatc
ttgctttatttagaagcggctcaaaatgcaattgaagaagcttaccaacaacttgaaatg
attggtgattacccaaaacacactgattttattgatcagcatcgccaatttattcgtcaa
atacgtttagatgatcagctaaataagaagttgatttttgaatatcagttcgggcgtatg
ccaactaagcctaaagcagttcgagaagatgaatctttaaatgaagcgtatgatattttt
aaaagtaactatgatcaatttaaagactatttgagccaagtccaaactttatttgtaggc
cgtgaagatgacacattattaaaagaattaaaggatttagcaccgcgtgttaaatattta
tctgtactgacacaagatgtgattcatgcttttcgtgaggcaaaaaaggcgcgtaatatt
ttggatttctctgattacgaacattatgctttggaaattttgcttaatgaagatggcacg
ccatctgaaatcgctgaaatttatcgacaacgttttgatgaaatcttggtggatgaatat
caagataccaaccgtgtccaagaaaaaattattgcgagtattaagcgcggcaatgaatca
aatggtaatttgtttatggtcggtgatgtaaaacaatccatttataaatttagacaggcc
gatccaagtctttttatcgaaaagtatcaaagattcaatcagcaggatcaatcaagtggt
tggcgtatcgatttatctcaaaacttccgctcacgttcagaagtcttagcaacgacaaat
tatctttttgaacatatgatggacacggaagtaggagagatagaatacgatgcagctgct
aaattgtattacggtgcaccatatgatgaagtcgatatgccagtacagttcaatattttt
atggtagatgaaaatattgaacacaccgcgagcgaacaagaagcgtatgggattgctgaa
caagttgaagcaatacttaaaactaaaaaagtttatgacatgaaaacaggtacataccga
cctgcgcagtataaagacattgtgatattagaaagaagttatagcaatgcacgtaatatt
cagcaagtgtttaaagataaagatatacctttatttgttaatagtaagcaaggatatttt
gaacaaactgaaattcgactgatgttatccttcttgagaacaatcgataatcctttgcaa
gatatttatttagtcggtttaatgcgttcggtcatataccagtttacagaggatgagctt
gcgaaaattagagtcgtggcaccgaaagaagactacttttatcagtccattcaacagtat
ttacaatacgaagatgcagaacctatgcttgtaggtaaattagagcgttttttaagtgat
ttagaagcgtatcaatcatttagtttgagtcacccagtttatcaattgattgataaatta
tacaatgaccattacatcattcagtatttcagtggtttgattggtggcaaaggaagacgt
gccaatttacatggcttgtttaataaagcggtagaattcgaaaattcaagctttcgaggt
ttattccaatttattcgcttcattgatcaaatgattgagcgaggtaaagacttcggggaa
gaaaatgtcatcggcccaaacgacaatgtcgtgcgcatgatgacaatccatagcagtaaa
gggctcgaattcccatttgtaatttattctggtttgacacgagaatttaatacgaatgat
ttaggtaaacctgttgtattgaatcaacatgaagggttaggtttgcaatattatgatgcg
tctaaaggacttttttatccatctttgatatctatgagcattgatttaatcaataaaaaa
gagctaatctcggaagaaatgcggttaatctatgtcgcgttaacacgtgctaaggagcaa
ttgtttttaattggaacagccaagcaagaaaagcatttgcaacagttggcgacttcttcg
attacaaatggtaaattaaccgctattgaacgttttaatgcgaaaaatccattttctctc
atctacagtgtgttgagtaaatatcaaaataatgctttactaaaacatcaaagatttgag
tctgacaatgaaactttagatgcttctattgaacctaaagtgatacagcaacacatttta
gcagaggaaatacttcctgttgatgcggaatcagcgcaacaatttgatcattcgttagaa
gcattagaaacaaaactagcccaagaaccgtctaatgaagcaatacaactgcaaatagag
caacaacttttattttcttatccttatcaagaagcgatattaaaagcatcgaagcagtcg
gtttcagaattaaaacgacaattagaaactgaacaggcagatacgaattatgaaagggtt
agacaataccgattgggtgttgcgacttatgagcgtcctcagtttttacaagaggaaaag
caaacggcagcagaatttgggactttgatgcatacagtgatgcaacaccttccgtttaaa
aaagaaggattgtcagaagcggatttaaattattatcttgacagccttgttgagcaatcc
attattgatcatgcatcgcgacgtttggtcaaaacaaatgatattcaaacctttattaat
agtaagctgtatcgacgtattgcagagagtgatgaagtttatactgaaattccattcgtt
gtgaatcaagcacatgttgaatcaaaagcaaatcaagaggagccttcaatcattcaaggt
atgattgaccttgtttttaaagaaagcggacaatactattttgttgattataaaacagat
gcattaatgaagagaaaagggatgtcagacgaagcattcggagagagtttaaaaaataag
tatcgtgtacagatgacttattatcaacgtgcattagagacattattaaaaagtccagtg
tcgggctctctgtatttctttcaatatggtgaattaaagatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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