KEGG   Shewanella sediminis: Ssed_0023Help
Entry
Ssed_0023         CDS       T00596                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
sse  Shewanella sediminis
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:sse00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Ssed_0023 (fadB)
   01212 Fatty acid metabolism
    Ssed_0023 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Ssed_0023 (fadB)
   00650 Butanoate metabolism
    Ssed_0023 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Ssed_0023 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Ssed_0023 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Ssed_0023 (fadB)
   00310 Lysine degradation
    Ssed_0023 (fadB)
   00380 Tryptophan metabolism
    Ssed_0023 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Ssed_0023 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Ssed_0023 (fadB)
   00281 Geraniol degradation
    Ssed_0023 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Ssed_0023 (fadB)
Enzymes [BR:sse01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Ssed_0023 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Ssed_0023 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Ssed_0023 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Ssed_0023 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(27258..29408)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIARLCFNASGSVNKLDRETINSLDAALDAIQQDSHIQALVLTSA
KGAFIVGADITEFLGLFAQEDSVLLPWIAEANVVFNKLEDLPFPTISAINGFALGGGFET
VLATDFRIADTTAKIGLPETKLGLIPGFGGTVRLPRLIGTDNALEWITSGKDQRPEAALK
VGAIDAVVAPENLQASAIKMLKDALAEKLDWQSRRARKQAALTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMAAISVIEQAARCGRADALKVEHQAFVKLAKTDVAQALIGIFLNDQLVK
GKAKKAGKLAKNIDTAAVLGAGIMGGGIAYQSASKGTPIIMKDIAQPALELGLGEASKLL
AAQIKRGRSTPQKMAKVLNNITATLDYTPVKDVDVVVEAVVEHPKVKSMVLAEVEQNVSD
DAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGIDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFEAERFGQKNSKGFYAYSVDRRGKP
KKDVDPTSYELLGAEFGELKAFESEDIIARTMIPMIIETVRCLEEGIIATPAEADMGLVF
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQS
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacgattcaggttgagttacttgaggataatattgcccggtta
tgctttaacgcatcgggctctgtcaataaactggatagagagacgattaactctctcgat
gcagcattagacgcaattcagcaagactcacacattcaagcattagtactgacgtcagct
aaaggtgcttttattgtcggtgccgatatcactgagtttctcggcttatttgctcaagaa
gatagtgttcttcttccatggattgccgaagctaacgtggtattcaataagttagaagat
ctcccattcccaacaatttcagccattaacggcttcgcattgggtggtgggttcgaaact
gtgctggcaaccgatttccgtattgccgataccacagcaaaaattggtctgccagaaact
aagttgggcttaattcctggtttcggtggtaccgttcgtctacctcgccttatcggtacc
gataatgcgctggagtggataacatcgggtaaagatcaacgccctgaagccgcattaaaa
gttggcgctatcgatgcggttgttgctcccgaaaatttacaagcttcagccattaagatg
cttaaagatgcactggctgaaaagctcgactggcaatctcgccgcgcccgtaaacaggcg
gcactaacgctaccaaaattagaagccatgatgtcatttgctacagccaaaggcatggta
ttcaagatagcaggcaaacattacccggctccaatggcggcaatcagtgttatcgaacaa
gccgcaagatgcggacgtgctgacgcattgaaagttgaacaccaagcctttgttaagctg
gccaagaccgacgttgcacaggcattaatcggtatattccttaacgaccaactcgttaaa
ggcaaggcaaagaaagccggcaagttagcgaaaaatatcgatacagcagccgtactcggt
gccggtatcatgggtggtggtatcgcctatcagagtgccagcaaaggcactccgattatt
atgaaagatatcgcacaacctgccctcgaattgggtctgggcgaagcctctaagttactg
gccgctcagatcaagcgtggccgttcgacgcctcagaaaatggctaaggtcctcaataac
atcactgcgacccttgattacacaccggttaaagatgtcgacgttgtcgtagaagccgtt
gttgagcatccaaaagttaagtctatggtactggcagaggttgaacaaaacgttagtgat
gacgccatcatcacctcaaacacctcgaccatctcgatcaacctgctcgctaagagcctg
aagaagcctgagcgcttctgtggtatgcacttctttaacccggtgcataagatgccactc
gttgaggtcattcgtggtgagaatagttctgaagagactatcgcttccgttgtcgcttac
gccagcaagatgggtaaaacacctatcgttgttaacgactgccccggcttctttgtaaac
cgcgtgctctttccttactttgcaggcttcagcggcctgcttgcagacggcgcagatttc
gccgctatcgataaggtgatggagaagcaatttggctggcctatgggtccggcctacctg
ctcgatgtagtcggtattgataccggtcatcatgcacaagccgttatggccgaaggcttc
ccggatcgcatgggtaagaatggtaaagatgctatcgatatcatgttcgaagctgagcgc
ttcggacagaagaacagcaaaggtttctatgcttattcggtcgaccgtcgcggcaagcca
aagaaagatgtcgacccaaccagctatgagctattaggcgcagagtttggtgagcttaag
gcatttgaatctgaggatattatcgcccgcaccatgatccctatgattatcgaaacggtt
cgctgtctcgaagagggaattattgcgactccggcggaagccgatatgggtctggtattt
ggtcttggattcccgccattcagaggtggtgtgttccgctatatcgataccatgggtgta
gctaacttcgtggcacttgccgataaatatgctcacctaggtggcctatatcaagtaacc
gatgccatgcgcgaactcgccgctaataacggcagctactaccagtcttaa

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