KEGG   Shewanella sediminis: Ssed_1681Help
Entry
Ssed_1681         CDS       T00596                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
sse  Shewanella sediminis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:sse01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:sse00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sse00400]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2014834..2015652)
Genome map
AA seq 272 aa AA seqDB search
MTESKQAGRYQATFAALKAKNQGAFVPFVTLGDPGPELSLKIIDTLVENGADALELGFPF
SDPLADGPVIQGANLRALDAGTTPTQCFEMLSAIRAKYPELPIGLLLYANLVYANGVDTF
YAKANAAGVDSVLIADVPVEEAEPFILSAKKHDIAPIFIAPPNADSETLKLVSEKGAGYT
YLLSRAGVTGTESKAGMPIGDILNRLKEFDGAPPLLGFGIAEPSQVKAAIQAGAAGAISG
SAVVKIIDANKANETILLAKLGEFTRDMKAAT
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgaccgaatctaaacaagcaggccgttatcaggcaacatttgccgcactgaaagctaaa
aaccagggcgcatttgtcccctttgtcaccttaggcgatccaggccctgaactgtcactg
aaaattatcgacaccttagtggaaaacggcgcagatgcgctcgaactgggcttcccgttt
tcagaccctttagccgatggccccgtcattcagggcgcgaatctacgcgcactcgatgca
ggcaccactccgacgcaatgcttcgagatgcttagtgccattcgcgctaaatacccggag
ctccccattggcctgctgttatacgccaacttagtgtacgccaacggtgtggataccttt
tatgctaaggccaatgctgctggcgtcgattcggtattgattgccgacgtgcccgtcgag
gaggccgaaccatttatcctgtcggccaagaaacatgacatcgcacctatctttatcgca
ccacccaatgccgacagcgaaacccttaagcttgtcagtgaaaaaggggctggttacacc
tacctcttgtcccgtgcaggcgttaccggcaccgaatcaaaggcaggcatgcccatcggt
gatattctgaatcgcttaaaagagtttgatggtgcgccgccactgcttggttttggtatt
gccgagccttctcaggtcaaggctgccatacaggctggcgccgctggggcaatatcaggc
tctgccgtagtaaaaatcatcgatgcaaataaagctaacgaaacgattctcttagccaaa
cttggcgagtttacccgtgatatgaaagctgcgacataa

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