KEGG   Shewanella sediminis: Ssed_1681Help
Entry
Ssed_1681         CDS       T00596                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
sse  Shewanella sediminis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:sse00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Ssed_1681 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Ssed_1681 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Ssed_1681 (trpA)
Enzymes [BR:sse01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Ssed_1681 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2014834..2015652)
Genome map
AA seq 272 aa AA seqDB search
MTESKQAGRYQATFAALKAKNQGAFVPFVTLGDPGPELSLKIIDTLVENGADALELGFPF
SDPLADGPVIQGANLRALDAGTTPTQCFEMLSAIRAKYPELPIGLLLYANLVYANGVDTF
YAKANAAGVDSVLIADVPVEEAEPFILSAKKHDIAPIFIAPPNADSETLKLVSEKGAGYT
YLLSRAGVTGTESKAGMPIGDILNRLKEFDGAPPLLGFGIAEPSQVKAAIQAGAAGAISG
SAVVKIIDANKANETILLAKLGEFTRDMKAAT
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgaccgaatctaaacaagcaggccgttatcaggcaacatttgccgcactgaaagctaaa
aaccagggcgcatttgtcccctttgtcaccttaggcgatccaggccctgaactgtcactg
aaaattatcgacaccttagtggaaaacggcgcagatgcgctcgaactgggcttcccgttt
tcagaccctttagccgatggccccgtcattcagggcgcgaatctacgcgcactcgatgca
ggcaccactccgacgcaatgcttcgagatgcttagtgccattcgcgctaaatacccggag
ctccccattggcctgctgttatacgccaacttagtgtacgccaacggtgtggataccttt
tatgctaaggccaatgctgctggcgtcgattcggtattgattgccgacgtgcccgtcgag
gaggccgaaccatttatcctgtcggccaagaaacatgacatcgcacctatctttatcgca
ccacccaatgccgacagcgaaacccttaagcttgtcagtgaaaaaggggctggttacacc
tacctcttgtcccgtgcaggcgttaccggcaccgaatcaaaggcaggcatgcccatcggt
gatattctgaatcgcttaaaagagtttgatggtgcgccgccactgcttggttttggtatt
gccgagccttctcaggtcaaggctgccatacaggctggcgccgctggggcaatatcaggc
tctgccgtagtaaaaatcatcgatgcaaataaagctaacgaaacgattctcttagccaaa
cttggcgagtttacccgtgatatgaaagctgcgacataa

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