KEGG T00596: Ssed

Shewanella sediminis: Ssed_1883

Entry

Ssed_1883 CDS T00596

Definition

isocitrate dehydrogenase (NADP(+)) (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

sse Shewanella sediminis

Pathway

sse00020	Citrate cycle (TCA cycle)
sse00480	Glutathione metabolism
sse01100	Metabolic pathways
sse01110	Biosynthesis of secondary metabolites
sse01120	Microbial metabolism in diverse environments
sse01210	2-Oxocarboxylic acid metabolism
sse01230	Biosynthesis of amino acids

Module

sse_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sse_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sse00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:sse00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2269013..2271238

AA seq 741 aa
MTDKSSTIIYTETDEAPALATLSLLPIIKTFTQAAGVNVETRDISLSGRIIANFPNKLTD
AQKISDALGELGELVGKPDANIIKLPNISASIPQLKACILELQNKGYDIPSYPDEPANAA
EKAIQARYDKIKGSAVNPVLREGNSDRRAPGSVKKYAQKNPHSMGAWSRDSKSHVAHMSE
GDFYGSEKSLTLDKESNVHIVLAKKDGGEMVLRESLSLKVGEVIDASVMSKKSLVEFFER
ETQDAKAQGVLLSLHLKATMMKVSDPILFGHAVKVYYKELFAKHSELFEQLGVDVNNGLG
DVYAKIATLPEAQKAEVEADIAAIYQTRPELAMVDSDKGITNLHVPSDVIIDASMPAAIR
TSGMMWGVDGQPKDTKAMIPDRCYAGVYQETIQFCKENGAFNPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIQAAGTVRVIDNHGDVLLSHDVEAGDIWRMCQVKDAPIRDWVKLAVKRAR
LSSTPAVFWLDESRAHDAQIIKKVNQYLPEHDTDGLAIHIMSPVEATRFTLQRTKDGLNT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTTDNAKAQVLADTLDSAIGRFLDQNKSPLRRVGQLDNRG
SHFYLAMYWAQAVAEQSQDTELKAQFTGLAESLANSETTIVDELNNAQGNAVDLGGYYRL
DVDKAAAEMRPSATLNALFTV

NT seq 2226 nt +upstreamnt +downstreamnt
atgaccgacaaatcatcaacgattatctatactgaaacagacgaggcgccagccttagcc
actctgtctttattacctattatcaagacgtttactcaagccgctggtgtgaatgttgaa
actcgtgatatctctctatcgggtcggattattgctaatttccctaacaagcttacagat
gcacaaaaaatttcagatgccttgggtgaattaggtgagttagtgggtaagcctgatgcg
aatattatcaagctacctaacatcagtgcatcaattcctcagcttaaagcctgtatttta
gagttacagaataagggctacgatattccgtcatatcctgatgagcctgcaaatgcagcc
gaaaaagcgattcaggcacgctatgacaaaattaaaggcagcgcggttaatccggttctt
cgtgaaggaaactcagatcgtcgcgctccgggttcagtaaagaagtatgcacaaaagaac
cctcactcgatgggggcctggagtcgtgattcaaaatctcatgttgcgcatatgagtgaa
ggcgatttttatggtagtgagaaatcattaacgcttgataaagagagtaatgtgcatatc
gtactggccaagaaagatggcggtgagatggtattaagagagtcactctctttgaaggtc
ggtgaagtcatcgatgcttctgtcatgagtaaaaaatcactggttgagttcttcgagcgt
gaaactcaagacgcgaaggcacaaggagttctactctctctgcacttgaaagcgaccatg
atgaaagtctctgaccccattctttttggccatgccgttaaggtgtactacaaagagtta
ttcgctaagcactcagaactgtttgagcaactgggcgtggatgtaaacaatggtcttggt
gatgtctacgcgaagatagccacgcttccagaggctcaaaaagctgaagttgaagccgat
atagcagctatctatcagactcgtcctgagcttgctatggtcgattcagacaaagggatc
actaacctccatgtgcctagtgatgtgatcatcgatgcttctatgcctgcagccattcgt
acatcgggaatgatgtggggtgtagatggtcagcctaaagatactaaggcgatgatcccg
gatcgttgttacgccggtgtgtatcaagagaccattcaattttgtaaagaaaatggtgcg
tttaacccttctaccatggggagcgtgccaaatgtgggcttgatggcacaaaaggctgaa
gagtatggtagccatgataaaacgtttgagattcaggctgcgggtacggttcgagtcata
gataaccatggtgacgtactattgtcacatgacgttgaagctggtgatatctggagaatg
tgtcaggttaaagacgcgccaattcgtgattgggtgaaactggccgttaaacgcgcacgt
ctttcatcgactcctgccgtgttctggttagatgaaagccgtgctcatgatgctcaaatc
attaagaaagtgaatcagtatctgcctgaacatgacactgacgggttagcgatccacatc
atgtcaccggttgaagcgactcggtttacgctacaacgaactaaagatgggttaaatacc
atctctgtgaccggtaacgtactgcgtgattacctgaccgatctattcccaattctcgag
cttggaacgagtgcaaaaatgctctcaatagtccctttgatgaatggcggtggattattc
gaaaccggtgctggcggaagtgcgcctaagcatgttcagcaagtcgaaaaggaaggtcac
ctgcgttgggattctctgggtgagtttttggcgctggcggcatcgctggagcatctgagc
cagacgaccgataatgctaaggcacaagtattggccgatacattagatagcgcgattggc
cgattcctggaccagaataagtcaccattgcgccgtgtcggtcagctcgataaccgaggt
agtcatttctatctggcaatgtattgggctcaggcagttgcagagcagagtcaggataca
gaattgaaagcacagtttaccgggctggctgaatcactggcgaacagtgaaactacaata
gtcgatgaactcaataacgctcagggtaatgctgtcgacctgggtggttattatcgtctc
gatgtagataaagccgccgcagagatgcgtccgagtgcaacattaaatgcattgtttacg
gtttag

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SSE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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