KEGG   Shewanella sediminis: Ssed_1920
Entry
Ssed_1920         CDS       T00596                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
sse  Shewanella sediminis
Pathway
sse00470  D-Amino acid metabolism
sse00550  Peptidoglycan biosynthesis
sse01100  Metabolic pathways
sse01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sse00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Ssed_1920
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Ssed_1920
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Ssed_1920
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sse01011]
    Ssed_1920
Enzymes [BR:sse01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Ssed_1920
Peptidoglycan biosynthesis and degradation proteins [BR:sse01011]
 Precursor biosynthesis
  Amino acid ligase
   Ssed_1920
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 RimK
Other DBs
NCBI-ProteinID: ABV36531
UniProt: A8FUK8
Position
complement(2309461..2310462)
AA seq 333 aa
MSQTNLLLLCGGGGDEHAISLLSANFFETSLADITGFNVLRVELDADGHYHTKDGDICEL
TNRKQIRFEDESKRPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGCDSEASRNCFNK
VTAKMWFSALGIPNTPYIFLNEFNDDAISQTEQALETWGSVFIKAASQGSSVGCYRVDSI
DELASSLKEAFSYSPYVVVEKTIHARELEVAAYELDGEIVATKPGEIICASNTFYTFDEK
YAADSQAETKVEADISDELSREIREYAVKVFKGMKLSHLSRIDFFLTDENEILLNEINTF
PGLTPISMFPKMLQNHGDDFTEYLYSNIKSQLI
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgagccaaacgaatctacttttgttatgtggtggtggcggagatgaacacgcaatttcc
ctgctatcggcaaacttttttgaaacttcactcgccgacattactgggtttaatgtttta
cgggttgagctggatgccgatggccattatcacaccaaagatggcgacatttgcgaactg
actaaccgaaagcagataagattcgaagatgaaagcaagcgcccctggcccgttgattac
gtgatcccttgcattcatggttatcccggagaaaccggtgatattcaatcctattttgaa
ctgatcaacctgccctattttggctgtgattcagaagccagcagaaactgttttaataag
gtcacggctaagatgtggttcagtgcacttggcattcctaacaccccctatatctttctt
aacgaatttaatgacgatgcgatatctcaaactgagcaggcattagagacctggggctct
gtgtttatcaaagctgcttctcaaggttcatctgtgggttgttatcgtgtcgacagcatc
gatgagctggcgagctcattgaaggaagccttttcctactcgccttatgttgtggtcgaa
aaaaccattcacgctcgcgagctcgaagtcgctgcctatgagctggacggtgagatcgtt
gcaactaagccgggcgaaatcatctgtgccagtaataccttttataccttcgatgagaaa
tatgccgcagacagtcaggcagagaccaaggtcgaagccgatatcagtgatgaattgagc
cgagagatccgcgaatatgccgttaaggtatttaaggggatgaaactcagccatctctcc
cgcatcgacttctttctgaccgatgagaatgaaattctcctcaacgaaattaataccttc
ccgggacttacacctatttcgatgttccctaagatgctgcaaaatcatggtgatgatttt
acagaatacttatattcaaatattaagtcacaactgatctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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