KEGG   Shewanella sediminis: Ssed_2171
Entry
Ssed_2171         CDS       T00596                                 
Name
(GenBank) DNA-directed DNA polymerase
  KO
K03502  DNA polymerase V
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sse03400]
    Ssed_2171
DNA repair and recombination proteins [BR:sse03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    Ssed_2171
SSDB
Motif
Pfam: IMS DUF4113 IMS_C IMS_HHH
Other DBs
NCBI-ProteinID: ABV36780
UniProt: A8FVA7
Position
complement(2626778..2628031)
AA seq 417 aa
MFALVDANSFYCSAEQVFRPEWRGRPIVVLSNNDGCIVAANRQAVDAGIPKFEPFFKVKS
QCERLGVIALSSNYELYGSLSASMMEVIGRFAPEQHIYSIDESFLSFKHCSTAIPCLIKH
GEALRRAVWKETRLPVCVGMAETLTLAKIANHAAKKHEGYHGVCLIDNPQQRKAILLKML
PGDVWGIGRRLAKRLDMMGIKTAYALSQMAPGIARKQFSIEVERTVRELNGEACKGWDEA
RADKQQIFSTRSMGERIVDATSLQQALSKHAGIATSKAREQGSLCSVIHIFASNSPFDEH
PTGFKITHRFAYPTNDTGEITEVVNRIAARQFREGVRYYKVGVGLIDLVSEAHLQGDLFE
PPKNPALMRVYDRLNHRYGSDSLFMAAQGITPKWSMRRQYLSPQYTTCWKDLPKIQC
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgtttgctttggtcgatgccaactccttttactgctccgccgagcaggtatttcgtccc
gaatggcgcggtcgcccgattgtggttctgtcgaacaacgatggatgtatcgtagcggcg
aatcgtcaggccgttgatgccgggatccccaagttcgagccctttttcaaggttaagtca
caatgtgagcggttgggcgtgattgcactcagttcaaactatgaactctacggctcgttg
tcggccagtatgatggaggtcataggccgctttgcgcccgaacagcatatctacagcatc
gatgaatcctttctctcctttaaacactgctctacggcgatcccctgtttaattaagcat
ggtgaggccttgaggcgtgccgtctggaaagagacccgcttaccggtgtgcgttggcatg
gcagagacgctcaccctggccaagattgctaatcatgccgcaaagaaacatgagggatat
catggtgtctgcctaatcgacaatccacagcaacgtaaagcgatcttacttaaaatgctc
ccgggagatgtatgggggatcgggcgccgcttggctaagcgcctggatatgatgggcatc
aagaccgcctatgccctgtctcaaatggcgcccgggattgccagaaagcaattcagcatt
gaggtcgaacgcaccgtccgtgagctcaatggcgaagcctgcaaaggctgggacgaggcc
cgcgcagataagcagcagatattttccacacgtagcatgggtgagcggatagtcgatgcc
acctcactgcaacaggcattaagtaaacatgcgggaatagccaccagcaaggcaagagag
caaggctcactgtgttcggtaatacatatttttgcatcgaactcccccttcgatgaacac
ccgactggctttaaaatcacccaccgttttgcttatcctactaacgataccggcgagatc
accgaggtggtcaaccgcatagccgcacggcaatttcgagaaggggtccgctactacaag
gtgggtgtaggcttgatcgatctggtcagcgaagcacatctgcagggggatctgtttgag
cctcctaaaaaccccgcattaatgcgggtgtacgataggcttaaccataggtatggctca
gactcactctttatggctgcccaggggatcaccccgaaatggagcatgcgcagacaatac
cttagcccccaatacaccacatgctggaaggatctgcctaagatacagtgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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