KEGG T00596: Ssed

Shewanella sediminis: Ssed_2418

Entry

Ssed_2418 CDS T00596

Definition

succinyl-diaminopimelate desuccinylase

Orthology

K01439

succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]

Organism

sse Shewanella sediminis

Pathway

sse00300	Lysine biosynthesis
sse01100	Metabolic pathways
sse01120	Microbial metabolism in diverse environments
sse01230	Biosynthesis of amino acids

Module

sse_M00016

Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:sse00300]

SSDB

Motif

Pfam:

Peptidase_M20 M20_dimer Peptidase_M18 Polysacc_deac_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2939333..2940463

AA seq 376 aa
MSQDVLTLAQDLISRESVTPLDEGCQQLMADRLSAKGFDIESMVFDDTTNMWARRGNSGP
LFCFAGHTDVVPVGDLNRWHTPPFDPVVIDGYLHGRGAADMKGSLAAMLVATERFVEKHP
DHNGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTHKLGDIVKNGRRG
SLTGNLTVNGIQGHVAYPHLADNPIHNAAPALDELARMKWDNGNEFFPPTSFQIANINGG
TGASNVIPGSLEVMFNFRYSTEVTAEELIKRVLNILDAHGLDYDISWTFNGLPFLTGEGP
LLDATRDAIKQVTGTDTDPQTSGGTSDGRFIAPTGAHVIELGPVNATIHKVNECVKVADL
EQLALCYEVILEKLLC

NT seq 1131 nt +upstreamnt +downstreamnt
atgagtcaggacgtattaacgcttgcccaagatcttatctctcgtgagtctgtcactccc
ttagatgaaggctgccaacaactgatggccgaccgattgagtgccaaaggcttcgatatc
gaatccatggtctttgatgatacaaccaacatgtgggcgagacgtggtaatagcgggcct
ctattctgttttgcgggtcacaccgatgtggttcccgtgggcgatctgaatcgctggcat
acccctcctttcgatcctgtcgttatcgatggataccttcacggtcgaggcgccgcagat
atgaaaggctcactcgctgccatgttggttgccaccgagcgttttgtagagaagcacccg
gatcataacggatcaattgcctttttaattaccagtgacgaagaggggccatttatcaat
gggacaactcgggtcattgatacacttgaggcccgtaacgagaaaataacctgggcacta
gtcggtgagccctcttccacccataagctgggtgatatcgttaaaaatggccgcagagga
agtctgacaggcaacttaacggttaacggtatccaaggccatgttgcatatcctcacctt
gccgataatccaattcacaacgcagccccagccctcgatgagttagcccgcatgaagtgg
gataatggcaatgagtttttcccgccaaccagtttccaaatagccaatatcaacggtggt
accggcgcatcaaatgttattccgggttcactggaggtcatgtttaacttccgctactcg
acagaagtgaccgctgaagagttgattaagcgagtgctcaacatactcgatgcccatgga
ctggattatgacattagttggaccttcaatggcctccctttcctcaccggagagggccca
ctactcgatgcaacgagagacgcgataaaacaagtgacgggcactgataccgaccctcaa
acctctggtggcacttccgatgggcgctttatcgcaccgacaggcgcacatgtcatcgaa
cttggccctgtcaatgcgaccattcacaaagtgaacgagtgtgtaaaagtcgccgatctc
gaacaactcgccctttgttatgaagtcattttggaaaagctactttgctaa

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SSE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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