KEGG T00596: Ssed

Shewanella sediminis: Ssed_3155

Entry

Ssed_3155 CDS T00596

Definition

1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)

Orthology

K00099

1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]

Organism

sse Shewanella sediminis

Pathway

sse00900	Terpenoid backbone biosynthesis
sse01100	Metabolic pathways
sse01110	Biosynthesis of secondary metabolites

Class

Metabolism; Metabolism of terpenoids and polyketides; Terpenoid backbone biosynthesis [PATH:sse00900]

SSDB

Motif

Pfam:

DXPR_C DXP_reductoisom DXP_redisom_C DapB_N NAD_binding_3 Semialdhyde_dh NmrA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3812416..3813603)

AA seq 395 aa
MQRMVILGATGSIGSSTLSVIESNPDAYSVYALVANTSVEKMLALCETHRPQIAHMVDGQ
AAKSLKQRLPTSLNVEITTGEDQLIDIVSASCVDSVMAAIVGAAGLVPTLAAVKAGKRVL
LANKESLVMSGRLFIDEMRRSGARVLPVDSEHNAIYQALPESLQSNIGYCELEKAGVSHI
LLTGSGGPFLTSELASLASMTPAQACKHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA
ADDQLKVVIHPQSVIHSMVQYLDGSVLAQLGNPDMRTPIAHCMAYPQRIQSGVEPLDFFK
VGQLSFSEPDFNRFPCLALAMEACKQGQEATTVVNAANEISVQAFLENKIKFTDIAKVNE
ACLSQVAPQSLNSIEDIIRLDLQSRTYAAEWVKKI

NT seq 1188 nt +upstreamnt +downstreamnt
atgcagagaatggtaattttaggtgcgacaggttctattggctctagtacgttaagtgtc
atagaaagcaatcctgatgcctacagtgtgtatgctttggtcgctaataccagtgtcgaa
aagatgctcgctctgtgtgagacacatcgccctcaaattgctcatatggtcgatgggcaa
gcggctaaatcactcaagcaaagattacctacaagtctgaatgttgaaatcaccactggc
gaagatcaactgattgatattgtcagtgcaagttgtgtagacagtgtgatggctgcgatt
gtgggcgcagcgggtctggtgccaacattagcggcggttaaagccggcaaacgtgtattg
cttgccaataaagaatcattagtcatgtctggtcgactctttattgatgagatgaggcga
tcgggtgctcgggttcttcccgtcgatagtgaacacaatgcgatttatcaggctcttcct
gagtctctgcagagcaacataggttactgtgaactggaaaaagcaggcgtttctcatatt
ctcctcactggatccggtggtccgtttttaacctctgagcttgcttctctggcctcaatg
actcctgcacaggcttgtaaacatcctaattggtcgatggggcgtaagatctctgtcgat
tcagcgaccatgatgaacaagggattagagtatatagaggcgcgttggttgtttaatgca
gccgatgatcagcttaaagtcgttattcacccacagagtgttattcactctatggtgcag
tatttagatggctctgttttagctcagcttggtaatcccgatatgcgcacgcctatcgct
cactgcatggcttacccgcaaagaattcaatccggagttgaacctttagactttttcaaa
gtcggacagttaagcttctcagaacccgatttcaatcgtttcccctgtttagcattggct
atggaagcttgcaagcaggggcaagaagcgacgacggttgtcaatgccgccaacgaaata
tcggttcaggcatttttagaaaacaagattaagtttaccgatattgctaaagtaaacgaa
gcctgcttaagtcaggttgcaccgcagtcgttgaacagtattgaagatattattcggtta
gaccttcaatcgcgcacctatgctgcagaatgggttaagaaaatttaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SSE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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