KEGG   Shewanella sediminis: Ssed_3216Help
Entry
Ssed_3216         CDS       T00596                                 

Definition
tryptophan synthase subunit beta
Orthology
K06001  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
sse  Shewanella sediminis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:sse00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Ssed_3216
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Ssed_3216
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Ssed_3216
Enzymes [BR:sse01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Ssed_3216
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3899480..3900682)
Genome map
AA seq 400 aa AA seqDB search
MSKFEFAPMPDNQGFFGEYGGQIIPPELKSAMDAINQAYEEIRQTQGFQDELMQLFQDYV
GRPSPIYHAKRLSDKLGGAQIYLKREDLNHTGAHKINHCLGEALLAKYMNKKKVIAETGA
GQHGVALATACALVGIPCEIHMGQVDIEKEHPNVTKMKILGCKLVPVTQGTATLKDAVDS
AFVEYLKNPKDYLYAIGSVVGPHPFPKMVRDFQSIIGREAREQFQQKFNKLPDIITACVG
GGSNAIGLFTAFLDDSEVKIVGVEPAGKGLDTTEHSATLTLGTPGAIHGFKCYLLQDEAG
EPLPVHSIASGLDYPGVGPQHCYLKDIERAEYDSVTDEECLDAFMTLSRVEGIIPALESA
HAVAWAMREAAKLPKELQILVNLSGRGDKDADYVADKLGL
NT seq 1203 nt NT seq  +upstreamnt  +downstreamnt
atgagcaagttcgaattcgcccccatgcccgacaatcaaggtttttttggtgagtatggc
gggcagattattccgcctgagctaaagagtgcgatggatgcgattaatcaagcctacgaa
gagattcgacagactcaaggcttccaggatgagctgatgcagctgttccaggactatgtg
ggtcgcccaagccccatctatcatgccaaacgcttaagcgacaaactcggcggcgcgcag
atctatctcaagcgtgaagaccttaaccacaccggggctcataagatcaatcactgcctg
ggtgaggcgttactcgccaagtacatgaacaagaagaaggtgattgccgaaactggtgcc
ggccaacatggtgtcgcacttgctactgcctgcgccttggtggggatcccttgtgaaatt
catatgggtcaggtcgacatagagaaagagcatcctaacgttaccaaaatgaaaatctta
ggctgtaagctggtgcctgtcacccaaggtactgccaccttaaaggacgctgtcgacagc
gcctttgtggaatacctgaagaatccgaaagactatctttatgctatcggctctgtcgtt
gggcctcatcctttccctaagatggtgcgtgattttcaaagcattatcggtcgtgaggcc
agagagcagtttcaacagaaatttaataaacttcccgatatcatcactgcctgtgtgggg
ggcggctcgaacgccatcggcctattcactgcatttctggatgatagcgaggtgaaaatt
gtcggcgtcgaacctgccggtaaagggctggataccacggagcactcggctaccctcact
ttgggcacgccgggcgccattcatggctttaaatgctatctgctgcaagatgaagcgggt
gagccactaccggttcactccatcgcctcaggcttagattacccgggagtaggtccccag
cactgttacctcaaagatattgagcgtgcagaatatgattcggtcacagatgaagagtgc
ttagacgcctttatgacactgtcgcgggtcgaggggattattccggctctggagagtgcc
cacgccgtggcttgggcgatgcgcgaagccgccaagctaccgaaagagttgcaaatttta
gtcaacctgtctggccggggtgataaagacgccgactatgtagccgacaagcttggtctt
taa

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