KEGG S.sediminis: Ssed

Shewanella sediminis: Ssed_3518

Entry

Ssed_3518 CDS S.sediminis

Definition malate dehydrogenase (EC:1.1.1.38)

Orthology K00027 malate dehydrogenase (oxaloacetate-decarboxylating)
[EC:1.1.1.38]

Pathway sse00620 Pyruvate metabolism
sse02020 Two-component system

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:sse00620]
Environmental Information Processing; Signal Transduction;
Two-component system [PATH:sse02020]

SSDB

Motif Pfam: Malic_M malic
PROSITE: MALIC_ENZYMES

Other DBs NCBI-GI: 157376650
NCBI-GeneID: 5612351
JGI: Ssed3518
UniProt: A8FZ49

Position 4285304..4286992

AA seq 562 aa
MDDHKRPLYLPFAGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQ
YTNFTNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNR
GLFISYPNKDRIDDLLNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG
GISPAYTLPITLDVGTDNPNLLEDPMYMGWRHQRIGGEEYTEFVEAFMQAVHRRWPDALI
QFEDFAQKNAMPLLERYKDQYCCFNDDVQGTAAVTVGSLLAACKAAKTKLSEQRVTFLGA
GSAGCGIAEAIVAQMIAEGLSEEQARAQVFMVDRWGLLQDNMPTLLPFQQKLAQKCDDIE
GWDNFSENISLLDVVNNAKPTVLIGVSGAPGVFSEEIIKAMHSHCPRPIVFPLSNPTSRV
EATPKDLLHWTKGQALVATGSPFEPVVVEDETFEIAQCNNSYIFPGIGLGVLAAGAKRVS
NEMLMASSRALAECSPLALDGEGPLLPPLEEIHKVSKHIALAVGKVAIEQGHALPCTDEL
LEQSIEDNFWTAEYRRYKRTSF

NT seq 1689 nt +upstreamnt +downstreamnt
atggacgatcacaaacgcccgctctaccttccattcgcaggtccagctattctcgaagcc
cctttgatcaacaagggcagcgcattcaccgatgaagaacgagtttttttcaacctggaa
ggcctgcttccccatgtgattgaaaccatcgaggagcaagcctctcgagcctatgaccaa
tacactaatttcaccaacgatctcgacaaacatatctatctgagaaatatccaggacacc
aacgagactctctactatcgtctggttcagaatcatatcaccgagatgatgccgatcatc
tatacccctactgtgggtatggcctgtgagcgtttctcaaaaaactatcgtcgtaaccgt
ggcctgtttatctcctacccaaataaagatcgcatcgatgatctgttaaataactccacc
cgtcagaaagtaaaaattattgtggtgaccgacggtgagcgtattctgggtctgggagac
caaggtatcggtggtatggggatccccattggtaagctatcactctacaccagctgtggc
ggcatcagccccgcctataccctacccatcactctcgatgtcggtaccgacaaccctaat
ctgctcgaagatccgatgtacatgggctggcgccatcaacgtattggcggcgaagagtat
accgaatttgtcgaagcctttatgcaagcggtacatcgccgctggcccgacgcattaatt
caatttgaagattttgcgcaaaaaaatgcgatgccactgctcgagcgatataaagatcaa
tattgctgcttcaatgatgatgttcaaggcacggctgcagtaactgtcggttcattattg
gcggcctgtaaagcggcaaaaaccaagctaagtgagcaacgcgtcaccttcctcggcgca
ggttctgccggttgtggtatcgccgaagccattgtggcacaaatgatcgctgaagggctc
agcgaggagcaggcacgcgcacaggtcttcatggtcgaccgttggggcttactacaagat
aatatgcctaccctgttgccattccagcaaaagctggcgcagaaatgtgatgatatcgaa
ggctgggataatttcagtgaaaatatctcattgctggatgtcgtcaacaacgctaaacca
accgtattaattggcgtttccggtgcccccggtgtattcagtgaggagataatcaaggcg
atgcatagtcattgtcctcgtccaatcgtcttcccgctatctaacccaacgagccgcgtc
gaagccacaccgaaagatctcctgcactggactaagggtcaggcactcgttgcaacgggt
agcccattcgagccagtagtcgtggaagatgaaacctttgaaattgcccagtgtaataac
agctatatcttcccgggcataggcctgggagtcttagccgccggagccaaacgggtcagc
aatgagatgctgatggcatcgagtcgtgcgttagccgagtgttcaccacttgcactcgat
ggcgaaggcccactgctaccaccgctggaagagatccacaaggtcagtaagcatatcgcc
cttgccgtaggtaaggttgccatcgagcaaggacacgccctcccctgtaccgatgagcta
ctcgagcagtctatcgaagataacttctggaccgcagagtatcgacgttacaagagaacg
tcgttctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SSE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (16)

DBGET integrated database retrieval system