KEGG   Shewanella sediminis: Ssed_4066
Entry
Ssed_4066         CDS       T00596                                 
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
  KO
K13040  two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
Organism
sse  Shewanella sediminis
Pathway
sse02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sse00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Ssed_4066
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sse01001]
    Ssed_4066
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sse02022]
    Ssed_4066
Enzymes [BR:sse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.13  Protein-histidine kinases
    2.7.13.3  histidine kinase
     Ssed_4066
Protein kinases [BR:sse01001]
 Histidine kinases
  LuxR family [OT]
   Ssed_4066
Two-component system [BR:sse02022]
 LuxR family
  TtrS-TtrR (tetrathionate respiration)
   Ssed_4066
SSDB
Motif
Pfam: Phosphonate-bd HATPase_c HisKA NMT1_3 HATPase_c_5
Other DBs
NCBI-ProteinID: ABV38670
UniProt: A8G0P7
Position
complement(4978201..4980042)
AA seq 613 aa
MPAVLFIIVMLISNAALAHSDEEASQLNTDMRLPERHLRVGVLANHGVMQGKLRWQPMMD
YLSERVPGANFEVVPLGFEDMSQQMLNHDIQFMITNPGQYFNLSSNFPLSWLATMKSRKH
QGTTFAIGATIIVRADSDIYTLNDLRGKSIVASGPQALGGYQAAVGLLHKMGYSPEQYFG
DLRFLGFPLEPIVYQVRDKTVEAAITPFCTLEEMIDSGLVKKEDFRVIHPTLPKGYDCLV
STQLYPNWSFAAAETVPTQITRAITQALYDLEPGDEAAISAKTMGWTAPVSQLKVIKLFK
ELQLKTPPPPLYQTVLKWMERNKEWGGALLLLFLISTVYHLWLEYKFRQKSEFLIDTERQ
LQDKALQLERLQSTAILGEIGSGLAHELNQPIAAITQYSEGGMMHLNSLGKADAETYEIL
AKINAQSLRAGAVVHRIRGLLKRRETSAEMINFDEVMNNSLVLFSAEFKRHSVQAKINTH
GTPFQLKGDEVGLSQVIANIIKNSLDAFGGDVKDSSDGDKRVSIWVNYRVDSVEVLFFDN
GPGLQKSAHELMASFCSTKRDGLGLGLAICKDVISQHDGQFTIQNCSELAKEQELPWQQG
CAVKIVLPKAIDH
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgcctgcggtactcttcatcatagtaatgcttatatcaaatgcagccttagctcactcc
gatgaagaggcgagtcagctcaacacagacatgcgtcttcctgagcgtcatttgcgggtc
ggtgtactggccaaccatggtgttatgcagggcaagctgcgctggcagcctatgatggac
tatctgtccgaaagagtaccgggagcaaatttcgaggtcgtgcctttaggttttgaagat
atgagccaacagatgctcaatcatgatattcagtttatgatcaccaacccgggccaatat
tttaacctgagcagcaactttcccctctcctggttagcgacgatgaagagccgtaagcat
caaggcaccacgtttgccatcggcgcgacgattattgttcgtgccgacagtgatatctat
acccttaacgatctcagaggtaagagtatcgtagccagcggtcctcaggcgctgggcggc
tatcaagctgccgtcggcttgttacataagatgggctactctccggagcaatactttggc
gacctgcgtttcttaggttttccactggaacccatcgtctatcaggtaagggataaaacc
gtcgaggcggcgatcacgcctttctgtaccctcgaagagatgatagacagtggcctggta
aagaaagaggactttcgggttattcaccccaccttgcccaaagggtacgactgcctggtc
agtacccaactctatcccaattggtcatttgccgccgccgagacggtgccgactcagata
acacgggcaataacccaggcgctgtatgacttagagcccggtgacgaagccgcgattagc
gcaaaaactatgggatggaccgcccccgttagccaactcaaggtgatcaaactttttaaa
gagttacagttgaaaactccgccaccgccgctctatcaaactgtcttgaaatggatggag
agaaacaaggagtggggaggcgcgctgctgttactcttccttatttcgacggtttatcac
ctctggctggagtacaagttcaggcaaaagagtgagtttcttatcgataccgagagacag
ctacaggacaaggccctgcagctggagcgcctgcagagtaccgcaattttaggggagata
ggttccggactcgctcatgagctgaatcaacccatagcggccatcactcaatacagtgaa
gggggcatgatgcatctcaatagtctgggaaaggcggacgcagaaacctatgaaatatta
gcgaaaatcaatgcgcaatccctgcgagccggcgccgtagttcatcggatcagagggtta
ctgaaacgacgagaaacatcggccgagatgattaacttcgatgaggtcatgaataactca
ttagtgttgttttccgccgagtttaaacggcactcagtgcaagcgaaaatcaacactcac
ggcaccccctttcagctcaaaggcgatgaggttggtttgagccaggtgattgccaatatc
atcaaaaatagtttagacgccttcggcggggacgttaaagacagtagtgatggtgacaag
agagtgagtatctgggtgaattatcgggtcgactcagtagaggtgctatttttcgataat
ggcccggggctgcagaagtcagcccatgagttaatggcatcattctgctctaccaaacga
gacggtctgggcttagggttagccatctgtaaagatgtgatctctcagcatgatggccag
ttcaccattcaaaattgcagtgagctcgccaaggaacaagagcttccctggcaacagggc
tgtgcggtgaagatagtgttgccaaaagctattgatcattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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