KEGG   Streptococcus suis A7 (serotype 2): SSUA7_0898
Entry
SSUA7_0898        CDS       T02020                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ssf  Streptococcus suis A7 (serotype 2)
Pathway
ssf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SSUA7_0898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssf03400]
    SSUA7_0898
DNA repair and recombination proteins [BR:ssf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SSUA7_0898
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SSUA7_0898
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD Kinesin AAA_30 AAA_22 AAA_19 UB2H AAA_7 Microtub_bd AAA_16 AAA_5 AAA_25 AAA IQ_SEC7_PH AAA_14
Other DBs
NCBI-ProteinID: AER44221
Position
complement(944370..946355)
AA seq 661 aa
MINRNTENQFKLVSKYAPSGDQPQAIETLVDNIEGGEKAQILMGATGTGKTYTMSQVIAR
VNKPTLVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYSDSVVSLRPGQEISRDQLLNA
LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQLKVFEAEGKLLEAQRLKQRTDYDIE
MLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFFPEDYLIMIDESHMTMGQIKGMYNGDR
SRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTETVVEQIIRPT
GLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI
QTIGRAARNSEGHVIMYADKVTESMRKAMEETARRRQIQMAYNEEHGIIPQTIKKEIRDL
ISVTKAVTQDKEEVVDFNALNKDERKAMIKKLEGQMQEAAEVLDFELAAQIRDMVIELKN
M
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgatcaatcgaaatactgaaaaccaatttaaacttgtgtcaaaatatgcaccgtctggt
gaccagccccaagccattgaaaccttggttgataacatcgaggggggcgaaaaagcccag
attctcatgggggcgactggtactggtaagacctataccatgagccaggttatcgcccgt
gtcaataagccaaccttggtcatcgcccacaacaagaccttggctggtcagctttatagt
gagttcaaggaattctttccagaaaatgcggtcgaatacttcgtgtcttactatgattac
taccagccagaagcttatgtaccgtctagcgatacctatatcgaaaaggatagttcggtc
aatgatgagattgacaaactccgtcactctgcgacctcagctctgctagaacgcaatgat
gtcattgtggtagcttctgtttcttgtatctacggtttgggttcacccaaggaatattca
gatagcgtggtcagcctgcgaccaggtcaggagatttcccgtgatcagttgctcaatgcc
ttggtggatatccagtttgagcggaacgacatcgacttccaacggggacggttccgtgtg
cgtggcgatgtggtggagattttcccagcttcccgtgacgaacatgcctttcgtgtggag
tttttcggggatgaaatcgaccgcattcgtgagattgaaagcctgacaggcaaggttttg
ggcgatgtggaccacttggccattttccctgccacccacttcgtgaccaacgatgaccac
atggaaacggccattgccaagattcaggcggaactagaagagcaactcaaggtctttgag
gcagaaggaaaactcttagaagctcagcgattgaaacaacgaaccgactacgatatcgag
atgcttcgggagatgggctataccaacggagttgagaactattcacgacacatggacggg
cgaagtgagggggagcctccttataccctgctggactttttccctgaggactatctgatt
atgattgacgagagccacatgaccatggggcagattaaggggatgtacaatggtgaccgc
tcacgcaaggagatgctggttaactatggtttccgtctaccgagtgcattggataatcgt
ccgctgcgcagggaagaatttgagagtcatgtccaccagattgtctatgtatctgcgacg
ccgggtgactatgaaatggagcagacagagaccgttgtcgagcagattatccggccgacc
gggcttttggatccagaagtggaagtccgtccaactatgggccaaatggacgacctccta
ggtgaaatcaatgcccgtgttgaaaaaggcgagcgaacctttatcactaccctgaccaag
aaaatggcagaggacttgaccgactacctgaaagaaatgggcgtcaaggtcaagtatatg
cactcggacatcaagaccttggagcgtacggagattatccgtgatcttcgcttgggtgtc
tttgatgttttgatagggattaacctgcttcgtgaagggattgacgtgccagaagttagt
ctagtcgctatcttagacgcagacaaggagggcttcctccgtaatgaacgggggctcatc
cagacaatcggtcgagcggctcgtaactctgaaggtcatgtgattatgtatgcggacaag
gtcaccgagtccatgcggaaggccatggaagaaacagcccgccgccgtcaaatccagatg
gcttataatgaagagcatggcattattccacagaccattaagaaagagatccgtgacctg
attagcgtgaccaaggctgtcactcaggacaaggaagaggttgtggacttcaatgctctt
aataaagatgaacgcaaggccatgatcaagaaactggaaggtcagatgcaggaagccgca
gaagtgcttgactttgaactggcagcccagattcgcgatatggtcattgagttgaagaat
atgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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