KEGG T01071: SS1G

Sclerotinia sclerotiorum: SS1G_01708

Entry

SS1G_01708 CDS T01071

Definition

hypothetical protein

Orthology

K12621

U6 snRNA-associated Sm-like protein LSm2

Organism

ssl Sclerotinia sclerotiorum

Pathway

ssl03018	RNA degradation
ssl03040	Spliceosome

Module

ssl_M00396	Lsm 2-8 complex
ssl_M00397	Lsm 1-7 complex

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:ssl03040]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:ssl03018]

SSDB

Motif

Pfam:

LSM SM-ATX

Other DBs

NCBI-GI:

156063184

NCBI-GeneID:

5493379

UniProt:

A7E8T0

AA seq 89 aa
MLFFSFFKTLVDSEVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNV
FIRGSVVRYVHLPGGAVDTTLLEDGRGPS

NT seq 270 nt +upstreamnt +downstreamnt
atgctattcttcagcttcttcaagaccttggtggattctgaagttacggtcgagcttaag
aacgatattcaaatcaaaggcatattaaaatcggtcgatcaatacctgaatattaagctg
gatgatatacaagtagtggaggagctgaaatatccacacctgtcgtcggtcaagaatgtt
ttcatacgaggaagtgtcgttagatacgtacatcttcctggtggcgcagttgatacaaca
cttttggaagatggtaggggtccttcatag

All links

Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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