KEGG T01071: SS1G

Sclerotinia sclerotiorum: SS1G_04596

Entry

SS1G_04596 CDS T01071

Definition

hypothetical protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

ssl Sclerotinia sclerotiorum

Pathway

ssl03022	Basal transcription factors
ssl03420	Nucleotide excision repair

Module

ssl_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:ssl03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ssl03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

156057729

NCBI-GeneID:

5490368

UniProt:

A7EH04

AA seq 420 aa
MPKPLPLTALDQWVQPKSKRQKDQALSLLSRLHIVDITALSREDPQTVALTKSFGTSLRL
ALTGGGNHQSFGVPSSDHIAPHVDIDFLDVHARMQWEGILHYMVNNVAAGSGQEGSGPAG
SVKKLLDAGKLVTRGRSVGITQAGFSFLLQEANAQVWTLLLLWIENAESMGMDSVDVLSF
LFMLGSLELGRAYSTTTLTDAQHNMLGNLIDFGLIYLPPSAPTQFFPTRLATTLTSDASA
LRTVSAGFDAASKSAANQKGFIIIETNYRLYAYTNSPLQIAVLSLFTKLNTRYPNMVSGR
VSRDSIRTAISHGITSDQIITYLSTHAHPQLVKASTAAHGGPVLPPTVVDQIRLWQLENE
RMKAVPGFLFKEFDGQKEYEGCAKYAEEVGVLVWKNDAKRMFFVTRVEQLRDYIKARKIK

NT seq 1263 nt +upstreamnt +downstreamnt
atgcccaagcctttacctctcacagctctggatcaatgggtgcaaccgaagagcaagagg
caaaaagatcaagccctatccttactatcgcgactgcatattgtcgatattactgcgctg
agccgagaagatcctcagactgtagctctgactaaaagtttcggaacttctttacgactg
gcacttactggtggagggaatcatcaatcttttggagttccttcgtcggatcacattgcg
ccacacgttgatatagatttcttggatgtacatgctcgaatgcaatgggaggggattcta
cattatatggtcaataatgttgcagcaggttccgggcaggaaggaagtgggcccgcaggt
tcagttaagaaactactcgatgcaggaaagttagttacaagagggcgaagtgtgggtatc
actcaagctggattctcatttttattacaagaagccaatgcgcaagtctggactttactt
cttttatggattgaaaatgctgagagtatgggaatggattccgttgatgtactctctttc
ctattcatgctaggttcccttgaactcggacgtgcatatagcaccacaaccctcacagat
gctcaacacaatatgctcggcaacctcatcgactttggcctgatttacctccctccttcc
gctcccacacagttcttcccaactcgtcttgctacgaccctcacctcagacgccagcgct
cttcgtaccgtgtcagccggtttcgatgccgcttccaaatccgccgctaaccaaaagggc
ttcataattattgaaaccaactaccgcttatacgcctacacaaattctccgcttcaaatt
gccgtcctctcactctttaccaaacttaacactcgataccccaacatggtcagcggccgc
gtctctcgtgattccatacgtactgccatatctcacggtatcacttccgatcaaataatc
acctacttatccacccatgcgcacccgcaactcgtcaaagcctctactgcagctcatgga
ggaccagtattaccacctacggtcgttgatcaaattcgtctctggcaattggaaaacgag
agaatgaaagcagtgccggggtttttgttcaaggaatttgacgggcagaaggagtatgaa
gggtgtgcgaaatatgccgaagaagtaggagtattggtttggaagaatgatgcgaagagg
atgtttttcgtaacgagggtggagcagttgagggattatattaaagcgaggaagataaaa
tag

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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