KEGG   Sediminispirochaeta smaragdinae: Spirs_1460
Entry
Spirs_1460        CDS       T01287                                 
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ssm  Sediminispirochaeta smaragdinae
Pathway
ssm00300  Lysine biosynthesis
ssm00470  D-Amino acid metabolism
ssm01100  Metabolic pathways
ssm01110  Biosynthesis of secondary metabolites
ssm01120  Microbial metabolism in diverse environments
ssm01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Spirs_1460
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Spirs_1460
Enzymes [BR:ssm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Spirs_1460
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Radical_SAM
Other DBs
NCBI-ProteinID: ADK80587
UniProt: E1R552
Position
complement(1568836..1570098)
AA seq 420 aa
MSEKRFPFSKEVIERLADTLPTPFHLYDEAAILENARYIKKAFAWAPGFKNYFAVKACPN
PTILDLLHKEGFGTDCSSLPELILSEKSGIAGEEVMFTSNDTPAEEFKEAKRLGAIINLD
DISHIDFLEKAAGIPELICFRYNPGDARSGNVIIGEPKEAKYGITRDQILDAYRMAKEKG
AKRFGLHTMVASNELNPEYFIETGRMLFELAVKIKEELGIKLEFVNLGGGIGIPYRLDQE
PVDLVRVSEGIKGWYDKMIVPAGLDPLKIVMECGRVVTGPYGYLITRVRHIAKKYKTYVG
LDASMANLMRPAIYGAYHHITVLGKENEPPAMVCDVTGSLCENNDKFAIDRNLPEIEVGD
LIAIHDAGAHGYAMGFNYNGKLRSAEVLIKDPETVELIRRAETMDDLFATLRFPGAPVKM
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgagcgaaaaacgctttcccttttccaaagaagtgatagaacggcttgccgataccctg
ccgacccctttccatctttacgatgaggcggcaatactcgaaaatgcccgctacataaaa
aaggcctttgcctgggcacccggtttcaaaaactatttcgccgttaaggcatgtcccaat
ccgacgatcctcgacctgctccataaggaaggcttcggcaccgattgcagcagcctgccc
gagctcattttgagtgaaaaaagcggcatcgcaggcgaagaggtgatgtttaccagtaac
gataccccagccgaggagtttaaagaggcaaaacggctgggagcaatcatcaacctcgac
gatatctcccatatcgattttctcgaaaaggcggcggggatacctgagctgatctgcttt
cgctacaatcccggcgacgcacggagcggcaacgtaattatcggtgagcccaaagaagca
aaatacggtattacccgcgaccagattctggacgcttatcgcatggcaaaggagaaaggg
gccaagcgttttggactgcacaccatggtggccagtaatgagcttaatcccgaatacttc
atcgagacgggaaggatgcttttcgaactcgccgtaaagatcaaagaggagctcggcatc
aagctggagttcgtcaatctcggcggcggtataggcatcccctatcgcctcgaccaggaa
ccggtggatctggtgcgggtctccgagggcatcaagggatggtacgataagatgatcgtt
cccgcaggcctcgaccccctgaaaatcgttatggagtgcggcagagtggtcacaggacct
tacggctacctcatcactagggtccgccacattgcgaagaaatacaaaacctacgtcggg
ctggatgcttccatggcaaacctgatgcggccggccatctatggagcctaccaccacata
accgttttgggaaaagaaaacgagccgcctgccatggtttgcgatgttaccggatcgctt
tgtgagaataacgataaattcgccatcgacaggaacctgcccgagatcgaagtcggcgat
cttattgccatccacgacgcaggagcgcacggctatgccatgggcttcaactacaacgga
aaactgcgaagcgccgaggtgcttatcaaagatcccgaaaccgtggagctcatacgacgg
gcagaaaccatggatgaccttttcgccaccctgcgttttcccggtgcaccggtaaagatg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system