KEGG   Sediminispirochaeta smaragdinae: Spirs_1644
Entry
Spirs_1644        CDS       T01287                                 
Name
(GenBank) (Uracil-5)-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ssm  Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssm03009]
    Spirs_1644
Enzymes [BR:ssm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Spirs_1644
Ribosome biogenesis [BR:ssm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Spirs_1644
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_23 Methyltransf_31 TRAM Methyltransf_11 Methyltransf_12 Methyltransf_15 MTS TPMT TehB mRNA_G-N7_MeTrfase Cons_hypoth95 MetW Methyltransf_32
Other DBs
NCBI-ProteinID: ADK80771
UniProt: E1R606
Position
complement(1760231..1761406)
AA seq 391 aa
MNVDTYHITIESLAFGGDGVGTIEAPQSSLNGIRCFVPFSAPGDVLSIRIRHRGKRFVRG
ELLSIEIPSPNRTNPKCPHFGTCGGCQWQHIDYTTQLNSKSEILRQNLARIATIDVTPEE
PIASPRVYAYRSRARLRSGENGRLGYHAASSHNVIAIDRCPVLTPDLEKRVIGGIESSTE
FPHDSQFLFQEMGGNDHRVQWERIGNGGDEPIGFRQANEGVNKLLQNEIARFITQSEARV
LDLYCGDGNLSLPLARQGCRVRGFDIATSSIKQANRLWRERSTDTHQVSYQRLDAMEAVK
AMQQGAIRPFDAERPDVILLDPPRSGVGSEGMQALCTLKAQRILYLSCDPATLSRDLKSA
SAAGYHLLTVRAADMFPQTYHLESFAVLERG
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgaatgtcgacacctatcatattacgatagaaagccttgccttcgggggtgacggagtg
gggacaatagaggccccccaaagctcactgaatggcatacgttgttttgtccccttctct
gccccaggtgatgtgctttccatacggataaggcaccggggaaagcgtttcgtgagagga
gaactgctttcgatcgaaattccttctccaaacagaacaaatccgaagtgcccccatttt
ggtacatgcggaggctgccaatggcagcatatagactacacaacccaacttaacagcaaa
agtgagattcttcgccagaatcttgcacgcatagcaacaatagatgttacaccggaagaa
cccatagcctctccccgagtctatgcttatagaagcagagcccggcttcgatccggagaa
aacggacgattaggctatcatgcggcatcaagccataatgtgatagcgattgatcggtgt
cccgtcttgactcctgacctggaaaagagggtgatcgggggcatagagagctcaacagaa
tttccgcacgattcccagtttcttttccaagagatgggagggaacgatcatcgggttcag
tgggaacgaatagggaacgggggggatgagccaatcggttttcgccaggcaaacgaaggg
gtcaacaagttgctacagaatgaaattgcccggtttattactcaaagtgaagcaagagtt
ctcgacctttattgcggagacggcaacctttctcttcccctggccaggcaaggctgccgg
gtcagaggctttgatattgccacctcatccatcaagcaggcaaacaggctctggagggaa
cgctcgaccgatacacatcaggtctcctaccaaaggctcgatgctatggaagcagtaaag
gccatgcaacaaggagcaatacgcccatttgatgccgaaaggcccgacgtaatcctcctc
gatcctccccgtagtggtgtgggaagtgaggggatgcaagcgctctgcacgctaaaagcc
caacgcatactctatctttcctgtgatccggcgaccctttcccgggatctaaaaagcgca
agcgcggcggggtatcaccttctcaccgtgcgggctgcggatatgtttccccaaacctac
cacctggaatcctttgctgtactggaaagggggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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