KEGG   Sediminispirochaeta smaragdinae: Spirs_2320
Entry
Spirs_2320        CDS       T01287                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
ssm  Sediminispirochaeta smaragdinae
Pathway
ssm00061  Fatty acid biosynthesis
ssm00071  Fatty acid degradation
ssm01100  Metabolic pathways
ssm01212  Fatty acid metabolism
ssm02024  Quorum sensing
Module
ssm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Spirs_2320
   00071 Fatty acid degradation
    Spirs_2320
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Spirs_2320
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ssm01004]
    Spirs_2320
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssm04147]
    Spirs_2320
Enzymes [BR:ssm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Spirs_2320
Lipid biosynthesis proteins [BR:ssm01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Spirs_2320
Exosome [BR:ssm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Spirs_2320
  Exosomal proteins of breast cancer cells
   Spirs_2320
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ADK81435
UniProt: E1R1Q9
Position
2480022..2481758
AA seq 578 aa
MLQIEKYIADWPDIEFPNFIAWLEESEKQWSGREALRYRRGNERNFTVWTYRHLAEEARR
IARGLLDLGLEKGDRVALWSENRPEWCAIWLGSVIAGLVIVPIDFLLHDHECKNIIDFAE
PKVVFLPSRKKILADMFADTAFRPKRFVLIDDDYLLFGQGAENHRLPKSCDILPDDPASL
IFTSGTTGLAKGVMLSHHGIIANANASILALPIYKDDVFMTILPLHHTYPTTCSFISPLS
VGASCTIVEKLVGKKIIADVKDSGGTIMIAVPLLYDKVKAAIAQGFNALPAPLRTLLSRL
QCLSLRFVQRGNRNFGKRLFFGLRKRIGLSSVRLMVAGGGPLNGETADFFDSLGFYIVQG
YGMSENGPLITTNTMKYKNNKSAGLAVKYTTIKIVDQNEEGVGEICVTSPSLMLGYFKNP
ETTEQMFTSDGYLKTGDLGYRDHDGFLFITGRKKNLIVTMGGKNIYPEEIEVQFEQSRIV
AEILVLGRKSEEHGGEEVFAAIVPGYEYIAETFPEIAGQREAIRALVKKEVEQVNRGLES
YKKISDFILRDEPFEKTSSQKIKRYLYREYEMTTSNGD
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgttgcagattgagaagtatattgcggattggcctgacatcgagtttcccaatttcatt
gcctggcttgaggaaagcgaaaaacagtggtcaggaagagaggctctcagataccgaaga
ggcaacgaacgaaattttactgtctggacctatcgacatcttgcagaagaagcgagaaga
atcgcacgagggcttttggatttgggactcgaaaaaggcgaccgggttgccttatggtcg
gaaaatcgtcccgaatggtgtgccatatggcttggaagcgtgatagcgggacttgtcatc
gttcccatcgattttctattgcatgatcatgagtgcaaaaatatcatcgatttcgccgag
ccgaaagtggtattcctcccctcccgaaaaaaaatattggcagatatgttcgcggatacg
gcctttcggcccaagcgatttgtccttatcgacgatgattatcttctttttggacagggg
gctgaaaatcatcgattacccaagtcctgcgatattctccctgatgatcccgcttccctt
attttcacctccggtaccacaggattggcaaagggggtcatgctcagtcaccacggcatc
attgccaacgcaaacgcctctatacttgctcttccaatatataaagatgatgttttcatg
acgatacttcccctccaccacacctatcccacaacctgttcctttatttcccccctttcg
gttggggcttcctgtaccattgttgaaaaactggtcggtaagaaaattattgcggatgtc
aaagattcggggggaaccatcatgattgcggttcctcttctctatgataaagtaaaggcc
gccatcgcccaaggtttcaatgcccttcccgctcccctaaggacactgctttctcggtta
caatgcctttctcttcgctttgtccaaaggggaaatcgtaattttggaaagcggctgttc
ttcggactgagaaagcgcataggcctttcgtcggtcagattgatggtggcaggagggggg
cctttgaacggagagaccgccgatttcttcgattccctcggattctatatcgtccaaggc
tatggaatgagtgaaaatgggcccttgatcacgaccaacaccatgaaatataagaacaat
aaatcggcaggcttggctgtcaagtatacaacgataaagatagtggatcagaatgaggag
ggagttggagaaatctgcgtaacatcgccctcacttatgcttgggtactttaaaaatccc
gaaacaactgagcagatgttcacgtcggacggctatttgaaaactggagatttgggctat
cgtgaccacgatggttttctattcattaccggtcgaaagaaaaatcttattgtaactatg
ggcggaaaaaatatctatccggaagagattgaggtgcaattcgaacagtcgcgtatagtc
gcggagattctcgtgctgggccggaaaagcgaggaacacgggggagaagaggtctttgca
gccattgttccaggctatgaatacattgcagagacctttcctgaaatcgcagggcagcgg
gaagccatcagagcgttggtgaaaaaagaggttgaacaggtcaacagaggccttgagtcc
tacaaaaagatatccgactttatattgagagacgagccttttgagaaaacatcttcacaa
aaaataaaacgctacctctatcgagaatatgagatgacaacgagtaacggcgattag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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