KEGG S.sonnei: SSON

Shigella sonnei: SSON_1042

Entry

SSON_1042 CDS S.sonnei

Gene name ycdW

Definition putative dehydrogenase

Orthology K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81]

Pathway ssn00260 Glycine, serine and threonine metabolism
ssn00620 Pyruvate metabolism
ssn00630 Glyoxylate and dicarboxylate metabolism
ssn01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:ssn00620]
Metabolism; Carbohydrate Metabolism; Glyoxylate and dicarboxylate
metabolism [PATH:ssn00630]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:ssn00260]

SSDB

Motif Pfam: 2-Hacid_dh_C NAD_binding_2 DUF551 NAD_Gly3P_dh_N PilN
PROSITE: D_2_HYDROXYACID_DH_3

Other DBs NCBI-GI: 74311585
NCBI-GeneID: 3670012
ShiBASE_China: SSO1042
UniProt: Q3Z393

Position 1125477..1126454

AA seq 325 aa
MRINFAQRFSGVSMDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHP
PVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQV
LHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSR
TRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLAR
GVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVE
YISRTIAQLEKGERVCGQVDRARGY

NT seq 978 nt +upstreamnt +downstreamnt
gtgcgaataaatttcgcacaacgcttttcgggagtcagtatggatatcatcttttatcac
ccaacgttcgatacccaatggtggattgaggcactgcgcaaagctattcctcaggcaaga
gtcagagcatggaaaagcggagataatgactctgctgattatgctttagtctggcatcct
cctgttgaaatgctggcagggcgcgatcttaaagcggtgttcgcactcggggccggtgtt
gattctattttgagcaagctacaggcacaccctgaaatgctgaacccttctgttccactt
tttcgcctggaagataccggtatgggcgagcaaatgcaggaatatgctgtcagtcaggtg
ctgcattggtttcgacgttttgacgattatcgcatccagcaaaatagttcgcattggcaa
ccgctgcctgaatatcatcgggaagattttaccatcggcattttgggcgcaggcgtactg
ggcagtaaagttgctcagagtctgcaaacctggcgctttccgctgcgttgctggagtcga
acccgtaaatcgtggcctggcgtgcaaagctttgccggacgggaagaactgtctgcattt
ctgagccaatgtcgggtattgattaatttgttaccgaatacccctgaaaccgtcggcatt
attaatcaacaattactcgaaaaattaccggatggcgcgtatctcctcaacctggcgcgt
ggtgttcatgttgtggaagatgacctgctcgcggcgctggatagcggcaaagttaaaggc
gcaatgttggatgtttttaatcgtgaacccttaccgcctgaaagtccgctctggcaacat
ccacgcgtgacgataacaccacatgtcgccgcgattacccgtcccgctgaagctgtggag
tacatttctcgcaccattgcccagctcgaaaaaggggagagggtctgcgggcaagtcgac
cgcgcacgcggctactaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (5)   
   PROSITE (1)   
All databases (22)

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