KEGG   Shigella sonnei Ss046: SSON_1677
Entry
SSON_1677         CDS       T00274                                 
Symbol
vgrE
Name
(GenBank) unknown protein associated with Rhs element
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ssn  Shigella sonnei Ss046
Pathway
ssn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SSON_1677 (vgrE)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssn02044]
    SSON_1677 (vgrE)
Secretion system [BR:ssn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SSON_1677 (vgrE)
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 DUF1419 Gp5_C
Other DBs
NCBI-ProteinID: AAZ88371
ShiBASE_China: SSO1677
UniProt: Q3Z1J1
Position
complement(1780702..1782810)
AA seq 702 aa
MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYL
TVWQGDDVQRRVKGVVTWFELGENDKNQMLYSMKVCPPLWRIGLRQNFRIFQNEDIESIL
ATILKENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEHAQKSTDQS
LVLCDTVRYLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKRPGWPGR
FDQEGQYQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGR
RIVLTGHPQANLNREWQVVASDLHGEQPQAVPGRRGSGTTLENHFAVIPADRTWRPQPLM
KPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWIRVAQAWAGTGFG
NLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSKTYKGSGFN
ELKFDDATGKEQVYIHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIETVGVN
QIETVGSNQIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQIGLHKSLR
VGLGYDVKVGNNVTFTVGKTKKDDTGQTAIYSAGEHLELCCGKARLVLTKDGQIFLNGTK
IHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgtcaaccggattacgtttcacactggaagtggacggcctgccaccggatgcttttgcg
gtggtttcctttcatttgaaccagtcactctcttcgctcttttccctcgatctctctctg
gtcagccagcagtttctctcccttgaatttgcgcaggtgctggacaaaatggcctacctg
acggtatggcagggcgatgacgtacagcgccgggtgaaaggtgtggtgacctggtttgaa
ctgggggagaacgacaaaaaccagatgctgtacagcatgaaggtatgcccaccgctgtgg
cgcatagggctgcgccagaacttccgtatcttccagaatgaggacatcgaaagcatcctc
gcgacgatcctgaaggaaaacggtgtgaccgagtggagtccgctgttcagcgagccgcat
ccttcccgtgagttttgtgtccagtacggcgaaactgattacgatttcctgtgccggatg
gcggcggaggaaggcatcttcttttatgaggagcacgcgcaaaaaagtaccgaccagagc
ctggtcctgtgcgacaccgtgcgttatctgccggagtcctttgagatcccctggaacccg
aacacccgtaccgaggtaagtaccctctgcatcagccagtttcgctacagcgcacaaatc
cgtccttcttccgtagtgaccaaagactacacctttaaacgtcccggctggccagggcgt
tttgatcaggaaggccagtaccaggattaccagcgcacgcagtatgaagtgtatgactac
cccggacgtttcaagggtgcccacgggcagaactttgcccgctggcagatggacggctgg
cgaaacaacgcagaagtggcgcgcggaacaagccgttcgccggagatatggccgggacgg
cgaattgtgctgacggggcatccgcaggcgaacctgaaccgggaatggcaggtggtggcg
agcgatcttcacggcgaacagccgcaggcggtaccgggacgcaggggttcaggcaccacg
ctggagaaccattttgcggtaatcccggcagacagaacatggcggccacagccgttgatg
aaaccgctggtggatggcccgcagagcgccgtcgtgacgggaccggcaggcgaggaaatc
ttctgtgatgaacatggccgcgtgcgggtgaaatttaactgggaccgctataacccgtca
aaccaggacagttcatgctggatccgtgtggcacaggcgtgggcaggcaccggctttggc
aacctggcgataccgcgtgtgggtcaggaggtgattgtggacttcctcaacggcgacccg
gaccagccgattattatggggcgtacctaccaccaggaaaaccgcacacccggcagcctg
ccggggacgaagacgcagatgaccattcgttcgaaaacctataagggcagcgggtttaat
gaactgaagtttgacgatgcgacagggaaagaacaggtctacatccacgcgcagaagaac
atgaacaccgaggtgctgaataaccgcaccacggatgtgataaacaaccatgctgaaacc
attggcaacaatcagatgattgcggttaccaacaatcagatagagacggtgggcgttaac
cagatagagacggtgggcagtaaccagataattaaagtgggttctgttcaggtggaaacg
attggacttgttcgtgcgctgacggtgggcgtggcgtatcagacgacggtaggtggcatt
atgaacacctcggtggcactgatgcagtcctcgcagatcggtttgcataaatcgttgagg
gtcgggctgggttatgacgtcaaagtcggaaataacgttaccttcaccgttggtaaaacg
aaaaaggatgataccgggcagaccgcgatttactccgccggtgagcatctggagctctgc
tgtggtaaggcaaggctggtgctgacgaaggacggacaaatttttctcaacggcacaaaa
attcatttgcagggtaaggagcaggttaatggtgactcactgttgattaactggaactgt
gcagcctcgaaatccccaccgaagacccctgatgaaaagcaggatacgccggatatgaga
gagtactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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