KEGG S.sonnei: SSON

Shigella sonnei: SSON_2624

Entry

SSON_2624 CDS S.sonnei

Gene name hcaD

Definition phenylpropionate dioxygenase ferredoxin reductase subunit

Orthology K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]

Pathway ssn00071 Fatty acid metabolism
ssn00360 Phenylalanine metabolism

Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:ssn00071]
Metabolism; Amino Acid Metabolism; Phenylalanine metabolism
[PATH:ssn00360]

SSDB

Motif Pfam: Pyr_redox_2 Pyr_redox Lycopene_cycl HI0933_like DAO
Trp_halogenase Thi4 3HCDH_N GIDA TrkA_N Shikimate_DH
2-Hacid_dh_C FAD_binding_3 Amino_oxidase ThiF FAD_binding_2

Other DBs NCBI-GI: 74313067
NCBI-GeneID: 3668244
ShiBASE_China: SSO2624
UniProt: Q3YZ11

Position 2775239..2776441

AA seq 400 aa
MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQ
QVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIAIGAAARPLPLLDA
LGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIELAATVM
GRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGEKVELTLQSGETLQADVVIYGIGIS
ANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQ
IAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDMRGDDWLCRGNPETQKAIWFNLQNGVL
IGAVTLNQGREIRPIRKWIQSGKTFDAKLLIDENIALKSL

NT seq 1203 nt +upstreamnt +downstreamnt
atgaaagaaaaaacgatcattattgtcggtggcgggcaagcggcggcaatggctgcggcc
tcgctacgccagcaagggttcaccggtgagctgcatctgttttccgatgagcgacatctt
ccttatgaacgacctccactctcgaaatccatgttgctggaagattccccgcagttacag
caggtgttacccgctaactggtggcaggaaaacaatgttcatctgcattccggtgtaacc
atcaaaacgctgggtcgcgacacacgagagttagtgttaaccaacggcgaaagctggcac
tgggatcagctttttatagcaatcggcgcggcagctcgaccgctgccgttgcttgatgca
ctgggagaacgctgctttaccctacgccatgccggtgatgccgccagactgcgagaagtt
ctgcagcccgaacggtcagtcgtgattgtcggtgccggaactattggtctggaactggct
gccagcgccacgcagcgcagatgtaaggtgacagtgattgaactggcggcaaccgtcatg
ggccgtaatgcaccaccgcccgtgcaacgctatcttttacagcgccaccagcaggctggt
gtgcgcattctgctcaataatgccattgaacatgtggtcgatggtgaaaaagtagaactg
acgctgcaaagtggggaaacgcttcaggctgatgtggtgatttacggtattggtatcagc
gccaacgagcaactggctcgcgaggccaaccttgatactgccaatggcattgtcattgat
gaggcttgccgcacctgcgatcccgcgatctttgccggtggcgatgtggcaatcactcgt
cttgataatggtgcactacaccgctgcgaaagctgggaaaacgccaataaccaggcgcaa
attgccgctgccgcaatgttagggctaccgctaccgctactgccgccgccgtggttctgg
agcgatcagtacagtgataacttacagtttattggcgatatgcgtggcgatgactggctt
tgtcgtggcaacccggaaactcagaaggcgatttggtttaatctgcaaaacggcgtgctt
atcggtgcggtcacgctgaatcaggggcgtgagattcgcccaattcgcaaatggatccag
agcggcaaaacgtttgatgcgaaactgctgatagatgagaacatcgcgcttaaatcactg
taa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (29)

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