KEGG   Shigella sonnei Ss046: SSON_3960
Entry
SSON_3960         CDS       T00274                                 
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
ssn  Shigella sonnei Ss046
Pathway
ssn00521  Streptomycin biosynthesis
ssn00523  Polyketide sugar unit biosynthesis
ssn00525  Acarbose and validamycin biosynthesis
ssn00541  O-Antigen nucleotide sugar biosynthesis
ssn01100  Metabolic pathways
ssn01110  Biosynthesis of secondary metabolites
ssn01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SSON_3960 (rffG)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SSON_3960 (rffG)
   01055 Biosynthesis of vancomycin group antibiotics
    SSON_3960 (rffG)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SSON_3960 (rffG)
   00525 Acarbose and validamycin biosynthesis
    SSON_3960 (rffG)
Enzymes [BR:ssn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SSON_3960 (rffG)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short Sacchrp_dh_NADP KR
Other DBs
NCBI-ProteinID: AAZ90487
ShiBASE_China: SSO3960
UniProt: Q3YVH5
Position
4183212..4184279
AA seq 355 aa
MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI
CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLT
EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA
TTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLR
YAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagaaaaattctgataacaggtggtgccgggtttattggctcggcgctggtgcgttat
atcatcaacgaaacgagcgacgcggtggtagtggtcgataagctgacctacgccggaaac
ctgatgtcgctggcaccggtcgcgcaaagcgagcgctttgcctttgagaaagttgatatc
tgcgatcgggcagaactggcacgcgtattcactgagcatcagccagactgtgtcatgcat
ctggcagccgaaagccatgttgaccgttctattgacggcccggcagcgtttattgaaacc
aacattgtcgggacttatacattgcttgaagcggcgcgggcttactggaatacgctgacg
gaagataaaaaatcagcgttccgttttcatcatatctccaccgacgaagtatatggtgac
ctgcactcgacggatgatttcttcaccgaaaccacgccgtatgcgccgagcagcccttat
tccgcgtcaaaagccagcagcgaccatctggtgcgcgcctggctgcggacctacggtctg
ccgacgcttatcaccaactgctcgaataactacggtccttaccactttccggaaaaactg
atcccgctgatgatcctcaacgcgctggcgggtaaaccgctgccggtatatggcaacggg
cagcaaatccgtgactggctgtatgtggaagatcacgcccgcgcgctgtattgcgtggcg
accaccgggaaagtcggtgaaacctataatattggtggtcacaacgagcgtaagaatctc
gatgttgtggaaaccatttgcgagctgctggaagaactggctccgaacaagccgcacggc
gtggtgcactatcgtgacttgatcacctttgtcgctgaccgtccggggcatgatctgcgt
tatgccattgatgcttcgaaaattgcccgtgaacttggctggctgccacaggaaaccttt
gaaagtggaatgcgtaaaacggtgcagtggtatctggctaatgaaagctggtggaagcag
gtgcaggacggcagctatcagggcgagcgtttaggtctgaaaggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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