KEGG S.solfataricus: SSO0223

Sulfolobus solfataricus: SSO0223

Entry

SSO0223 CDS S.solfataricus

Gene name rpoA2

Definition DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)

Orthology K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]

Pathway sso00230 Purine metabolism
sso00240 Pyrimidine metabolism
sso01100 Metabolic pathways
sso03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:sso00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:sso00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:sso03020]

SSDB

Motif Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_7

Other DBs NCBI-GI: 15897170
NCBI-GeneID: 1455375
IGM_Orsay: SSO0223
UniProt: P58192

Structure

PDB: 3HKZ 2PMZ

Position complement(189372..190559)

AA seq 395 aa
MEGMIDEKDKPYLEEKVKQASNILPQKIVDDLKNLILNKEIIVTRDEIDKIFDLAIKEYS
EGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTLGLPRLIEIVDAKKVPSTP
MMTIYLTDEYKRDRDKALEVARKLEYTKIENVVSSTSIDIASMSIILQLDNEMLKDKGVT
VDDVKKAIGRLKLGDFMIEESEDSTLNINFANIDSIAALFKLRDKILNTKIKGIKGIKRA
IVQKKGDEYIILTDGSNLSGVLSVKGVDVAKVETNNIREIEEVFGIEAAREIIIREISKV
LAEQGLDVDIRHILLIADVMTRTGIVRQIGRHGVTGEKNSVLARAAFEVTVKHLLDAAAR
GDVEEFKGVVENIIIGHPIKLGTGMVELTMRPILR

NT seq 1188 nt +upstreamnt +downstreamnt
gtggaaggcatgattgatgagaaagataagccctatttagaggagaaagtgaagcaagct
tccaatatcctccctcaaaaaattgtagacgatttgaaaaatttgatattaaacaaggaa
ataatagtgacgagagatgagattgataaaatcttcgatttggctattaaagagtatagt
gaagggttaatagctccaggagaggctattggaattgtagccgcacagtcagtaggtgag
cccggtacccaaatgacattaaggactttccattttgcgggtataagagagttaaatgta
actttaggacttccaaggctaatagaaattgtggatgcgaagaaagttccatctactcca
atgatgactatttatttaactgatgaatacaagcgtgatagggataaagcgttagaagtc
gccagaaaattagaatatacgaaaatagaaaatgtagtgagttcaactagtatcgatata
gcctcaatgtccattattctccaactcgataatgaaatgttaaaagataaaggcgttact
gtagatgatgttaaaaaagctataggtagattgaaattaggagattttatgatagaagaa
tctgaggatagtacattaaacataaatttcgctaatatagatagtatagctgcgctattt
aaactaagggataagatacttaataccaaaataaagggaataaagggtataaaacgtgct
atagtccagaaaaagggcgatgagtatatcattttaaccgatggttcaaatttatctggt
gttcttagtgtaaaaggagttgacgtagctaaagtagagactaataatatccgtgagatt
gaggaagtatttggaatagaagcggcaagggaaattataattagggagattagtaaagta
ttagcagaacaaggattggatgttgatataaggcatatattattaattgcggacgtgatg
acgagaacgggtattgtaaggcagataggtagacatggtgtaactggagagaagaatagt
gtattagcaagagctgcatttgaagttactgtaaaacatcttttagatgctgcggctaga
ggagatgtagaagaatttaaaggtgtagtagaaaacattataattggtcatccaattaaa
ctaggtactggaatggttgaattaacaatgaggccgatattaaggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-SSO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)

DBGET integrated database retrieval system